RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 VN1R2Q8NFZ6 395 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 ZNF689Q96CS4 500 aaPredicted RBP6.25□□□□□ -1.41
HOXB3-213ENST00000552000 APOL5Q9BWW9 433 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 BCAS3Q9H6U6 928 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 MLXIPQ9HAP2 919 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 TMPRSS4Q9NRS4 437 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 ZBTB40Q9NUA8 1239 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 MKL2Q9ULH7 1088 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 SUPT16HQ9Y5B9 1047 aaKnown RBP6.25□□□□□ -1.41
HOXB3-213ENST00000552000 FNDC1Q4ZHG4 1894 aaPredicted RBP6.25□□□□□ -1.41
HOXB3-213ENST00000552000 FANCMQ8IYD8 2048 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 ABCB11O95342 1321 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 CCDC171Q6TFL3 1326 aa6.25□□□□□ -1.41
HOXB3-213ENST00000552000 NOP56O00567 594 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 LILRB3O75022 631 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 DGKIO75912 1065 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 BRD1O95696 1058 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 CFBP00751 764 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 FGRP09769 529 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 SNHG28P0DPA3 235 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 HSPD1P10809 573 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 GNAT1P11488 350 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 IBSPP21815 317 aaPredicted RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 GATMP50440 423 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 LPIN1Q14693 890 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 QRICH1Q2TAL8 776 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 TUSC1Q2TAM9 212 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 NAALADL2Q58DX5 795 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 UTP14CQ5TAP6 766 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 MCTP2Q6DN12 878 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 KCNV1Q6PIU1 500 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 RUFY4Q6ZNE9 571 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 DGLUCYQ7Z3D6 616 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 IL31RAQ8NI17 732 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 ATP8B4Q8TF62 1192 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 LMBR1Q8WVP7 490 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 LINC01599Q8WXQ3 324 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 GTPBP3Q969Y2 492 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 RMDN1Q96DB5 314 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 NEK1Q96PY6 1258 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 PDCD2LQ9BRP1 358 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 SMOC2Q9H3U7 446 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 VAT1LQ9HCJ6 419 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 TCP11L1Q9NUJ3 509 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 FKBPLQ9UIM3 349 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 CDH22Q9UJ99 828 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 ANAPC4Q9UJX5 808 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 MRPL11Q9Y3B7 192 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 SETXQ7Z333 2677 aaKnown RBP6.24□□□□□ -1.41
HOXB3-213ENST00000552000 DOCK8Q8NF50 2099 aa6.24□□□□□ -1.41
HOXB3-213ENST00000552000 DOCK6Q96HP0 2047 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 KRBA1A5PL33 1030 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 C2CD4DB7Z1M9 353 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 OIP5O43482 229 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 DHX16O60231 1041 aaKnown RBP6.23□□□□□ -1.41
HOXB3-213ENST00000552000 HOXA13P31271 388 aaPredicted RBP6.23□□□□□ -1.41
HOXB3-213ENST00000552000 CD52P31358 61 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 TECP42680 631 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 HAND2P61296 217 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 ADAM17P78536 824 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 SP4Q02446 784 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 PTK2Q05397 1052 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 MTMR3Q13615 1198 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 DUSP6Q16828 381 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 FBXO47Q5MNV8 452 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 GPATCH4Q5T3I0 446 aaKnown RBP6.23□□□□□ -1.41
HOXB3-213ENST00000552000 LLGL2Q6P1M3 1020 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 SYCE2Q6PIF2 218 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 RTN4RL1Q86UN2 441 aaPredicted RBP6.23□□□□□ -1.41
HOXB3-213ENST00000552000 VSIG10LQ86VR7 867 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 UBALD2Q8IYN6 164 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 ADGRF4Q8IZF3 695 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 KCNG4Q8TDN1 519 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 MAF1Q9H063 256 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 S1PR5Q9H228 398 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 MFSD1Q9H3U5 465 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 EHMT1Q9H9B1 1298 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 DDX19BQ9UMR2 479 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 SORCS3Q9UPU3 1222 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 FRYQ5TBA9 3013 aa6.23□□□□□ -1.41
HOXB3-213ENST00000552000 DSPP15924 2871 aaKnown RBP6.22□□□□□ -1.41
HOXB3-213ENST00000552000 OPLAHO14841 1288 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 ASGR2P07307 311 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 STAG3L1P0CL83 205 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 ARP10275 920 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 TGFB3P10600 412 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 CCND2P30279 289 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 RNF144AP50876 292 aaPredicted RBP6.22□□□□□ -1.41
HOXB3-213ENST00000552000 HSD17B4P51659 736 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 ERVFC1P60507 584 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 MGAT3Q09327 533 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 APOBRQ0VD83 1088 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 PGM5Q15124 567 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 ALX1Q15699 326 aa6.22□□□□□ -1.41
HOXB3-213ENST00000552000 DBN1Q16643 649 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms