RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LRRC55Q6ZSA7 311 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 KREMEN2Q8NCW0 462 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 RIPOR3Q96MK2 946 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 DMDP11532 3685 aa16.08■□□□□ 0.16
CHMP1A-210ENST00000551981 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 GOLGA8BA8MQT2 603 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 CLCN3P51790 818 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 RNF169Q8NCN4 708 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 WDR81Q562E7 1941 aa16.07■□□□□ 0.16
CHMP1A-210ENST00000551981 EIF4BP23588 611 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 PBX3P40426 434 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 EFCAB12Q6NXP0 572 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 ECHDC2Q86YB7 292 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 MRPL43Q8N983 215 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 CRYGNQ8WXF5 182 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 SCLT1Q96NL6 688 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 MRPL9Q9BYD2 267 aaKnown RBP16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 ADAM7Q9H2U9 754 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 RNF19AQ9NV58 838 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 HCFC2Q9Y5Z7 792 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 SPTBN4Q9H254 2564 aa16.06■□□□□ 0.16
CHMP1A-210ENST00000551981 C2orf71A6NGG8 1288 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 EOMESO95936 686 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 CA8P35219 290 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 MTHFRP42898 656 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 ALDH7A1P49419 539 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 RCAN1P53805 252 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 SLC39A11Q8N1S5 342 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 NRBP2Q9NSY0 501 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 MYO10Q9HD67 2058 aa16.05■□□□□ 0.16
CHMP1A-210ENST00000551981 KLF18A0A0U1RQI7 1052 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 CCDC196A0A1B0GTZ2 297 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 CARNS1A5YM72 827 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 WDR64B1ANS9 1081 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 H0Y858 1186 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 PDGFBP01127 241 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 PRR16Q569H4 304 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 CLLU1OSQ5K130 101 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 HELQQ8TDG4 1101 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 RSPH1Q8WYR4 309 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 TMEM169Q96HH4 297 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 POMKQ9H5K3 350 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 DZANK1Q9NVP4 752 aa16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
CHMP1A-210ENST00000551981 A0A0U1RQF3 1178 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 BRD1O95696 1058 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 OATP04181 439 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 DARSP14868 501 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 GNA11P29992 359 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 GPC3P51654 580 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 FGD1P98174 961 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 EXOSC10Q01780 885 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 LRRC71Q8N4P6 559 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 LINC01465Q8N7H1 131 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 TDRD5Q8NAT2 981 aaKnown RBP16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 NLRP7Q8WX94 980 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 PLXNA3P51805 1871 aa16.03■□□□□ 0.16
CHMP1A-210ENST00000551981 PROB1E7EW31 1015 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 CXCL14O95715 111 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 CDC27P30260 824 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 BCAR1P56945 870 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 CDC42EP1Q00587 391 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 TBC1D8BQ0IIM8 1120 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 GIT2Q14161 759 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 KRT32Q14532 448 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 ATAT1Q5SQI0 421 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 RARS2Q5T160 578 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 ZNF598Q86UK7 904 aaKnown RBP16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 BICD2Q8TD16 824 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 MFSD1Q9H3U5 465 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 DISC1Q9NRI5 854 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 FAM217BQ9NTX9 383 aaPredicted RBP16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 CDH22Q9UJ99 828 aa16.02■□□□□ 0.16
CHMP1A-210ENST00000551981 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms