RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 Q4G0T1 1027 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 CT47A1Q5JQC4 288 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 CELF3Q5SZQ8 465 aaKnown RBP8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 SERINC5Q86VE9 423 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 TRIM50Q86XT4 487 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 MCF2L2Q86YR7 1114 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 LRRC15Q8TF66 581 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 STAMQ92783 540 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 LENG9Q96B70 501 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 CALML4Q96GE6 196 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 TRIM5Q9C035 493 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 BLZF1Q9H2G9 400 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 TTC12Q9H892 705 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 SUGCTQ9HAC7 445 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 KBTBD4Q9NVX7 518 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 LRWD1Q9UFC0 647 aa8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 MYH9P35579 1960 aaKnown RBP8.24□□□□□ -1.09
SMARCD1-210ENST00000551352 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 POTEMA6NI47 508 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 TBX3O15119 743 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 TREHO43280 583 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 SLC26A4O43511 780 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 MARCH6O60337 910 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 LGALS2P05162 132 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 PTMAP06454 111 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 LINC00271P0C7V0 271 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 CDC25BP30305 580 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 ERVK-21P61565 698 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 HTRA4P83105 476 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 LAMC2Q13753 1193 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 TMEM119Q4V9L6 283 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 PRR16Q569H4 304 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 KRT79Q5XKE5 535 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 FCHSD1Q86WN1 690 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 SLFN12Q8IYM2 578 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 DBF4BQ8NFT6 615 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 ETNPPLQ8TBG4 499 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 SP7Q8TDD2 431 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 SNX29Q8TEQ0 813 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 MRFAP1L1Q96HT8 127 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 INPP4AQ96PE3 977 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 PNMA5Q96PV4 448 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 PLIN2Q99541 437 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 MPHOSPH6Q99547 160 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 C17orf80Q9BSJ5 609 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 HSD3B7Q9H2F3 369 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 RNPEPQ9H4A4 650 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 EPHX3Q9H6B9 360 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 EHMT1Q9H9B1 1298 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 RMND1Q9NWS8 449 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 PCDHA12Q9UN75 941 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 NOD1Q9Y239 953 aa8.23□□□□□ -1.09
SMARCD1-210ENST00000551352 ZNF318Q5VUA4 2279 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 WDFY4Q6ZS81 3184 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 IGLV3-22A0A075B6J6 115 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 B4DLN1 442 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 FAM86B1E9PN63 330 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 RPN1P04843 607 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 FAM86B2P0C5J1 330 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 SMIM10L2AP0DMW4 78 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 SMIM10L2BP0DMW5 78 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 CD44P16070 742 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 ERCC5P28715 1186 aaPredicted RBP8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 ICAM3P32942 547 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 ZNF76P36508 570 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 CACNB1Q02641 598 aaPredicted RBP8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 KCNB1Q14721 858 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 PLEKHG4Q58EX7 1191 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 HYIQ5T013 277 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 CCDC155Q8N6L0 562 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 C7orf31Q8N865 590 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 ENOX1Q8TC92 643 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 GJA10Q969M2 543 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 CDK5RAP3Q96JB5 506 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 FAM20AQ96MK3 541 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 SPATA33Q96N06 139 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 GPR20Q99678 358 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 BLOC1S4Q9NUP1 217 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 KDM3AQ9Y4C1 1321 aa8.22□□□□□ -1.09
SMARCD1-210ENST00000551352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ABHD14A-ACY1A0A1B0GW23 586 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 GOLGA6L6A8MZA4 724 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ESPNB1AK53 854 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 PPP1R3GB7ZBB8 358 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 H3BRB1 525 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 MSH4O15457 936 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 KLRC4O43908 158 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 ATP9AO75110 1047 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 PPFIA4O75335 1185 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 CTSHP09668 335 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 CCND2P30279 289 aa8.21□□□□□ -1.1
SMARCD1-210ENST00000551352 CCT6AP40227 531 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms