RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TTC38Q5R3I4 469 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 FBXO22Q8NEZ5 403 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 NLRP7Q8WX94 980 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 SCLT1Q96NL6 688 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 C17orf80Q9BSJ5 609 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 GCOM2Q9BZD3 368 aaPredicted RBP21.24■□□□□ 0.99
DDX54-208ENST00000551344 DHX33Q9H6R0 707 aaKnown RBP21.24■□□□□ 0.99
DDX54-208ENST00000551344 PCDHB7Q9Y5E2 793 aa21.24■□□□□ 0.99
DDX54-208ENST00000551344 MGEA5O60502 916 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 XRCC6P12956 609 aaKnown RBP eCLIP21.23■□□□□ 0.99
DDX54-208ENST00000551344 POLGP54098 1239 aaPredicted RBP21.23■□□□□ 0.99
DDX54-208ENST00000551344 FAM189BP81408 668 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 DSC3Q14574 896 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 ZNF410Q86VK4 478 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 TMEM192Q8IY95 271 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 ZNF579Q8NAF0 562 aaKnown RBP21.23■□□□□ 0.99
DDX54-208ENST00000551344 INO80BQ9C086 356 aaPredicted RBP21.23■□□□□ 0.99
DDX54-208ENST00000551344 ANKEF1Q9NU02 776 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 LRFN2Q9ULH4 789 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 RWDD3Q9Y3V2 267 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.23■□□□□ 0.99
DDX54-208ENST00000551344 ADGRA3Q8IWK6 1321 aa21.23■□□□□ 0.99
DDX54-208ENST00000551344 COL4A6Q14031 1691 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 C9IYK1 514 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 GAS2O43903 313 aaKnown RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 RB1P06400 928 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 OR52Z1P0C646 297 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 ZSCAN20P17040 1043 aaPredicted RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 GJB2P29033 226 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 BTG3Q14201 252 aaPredicted RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 XKR9Q5GH70 373 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 RHPN2Q8IUC4 686 aa21.22■□□□□ 0.99
DDX54-208ENST00000551344 CLP1Q92989 425 aaKnown RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 ZNF668Q96K58 619 aaPredicted RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 PRRC2BQ5JSZ5 2229 aaKnown RBP21.22■□□□□ 0.99
DDX54-208ENST00000551344 ZBTB39O15060 712 aa21.21■□□□□ 0.99
DDX54-208ENST00000551344 TECP42680 631 aa21.21■□□□□ 0.99
DDX54-208ENST00000551344 CMTR2Q8IYT2 770 aaKnown RBP21.21■□□□□ 0.99
DDX54-208ENST00000551344 GDPD5Q8WTR4 605 aa21.21■□□□□ 0.99
DDX54-208ENST00000551344 TCP11Q8WWU5 503 aa21.21■□□□□ 0.99
DDX54-208ENST00000551344 ELAC1Q9H777 363 aaKnown RBP21.21■□□□□ 0.99
DDX54-208ENST00000551344 SMC3Q9UQE7 1217 aa21.21■□□□□ 0.99
DDX54-208ENST00000551344 A0A087WZ62 844 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 POTEMA6NI47 508 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 H3BNC9 293 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 ASAP2O43150 1006 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 BMPR1AP36894 532 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 TOB1P50616 345 aaPredicted RBP21.2■□□□□ 0.98
DDX54-208ENST00000551344 MICALL1Q8N3F8 863 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 C4orf32Q8N8J7 132 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 PSPC1Q8WXF1 523 aaKnown RBP21.2■□□□□ 0.98
DDX54-208ENST00000551344 FDXACB1Q9BRP7 624 aaPredicted RBP21.2■□□□□ 0.98
DDX54-208ENST00000551344 TUFT1Q9NNX1 390 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 CHST12Q9NRB3 414 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
DDX54-208ENST00000551344 C5orf67F2Z3F1 127 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 H3BQV1 296 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 LINC00271P0C7V0 271 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 SPATA31C1P0DKV0 1188 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 GPM6BQ13491 265 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 MCTP1Q6DN14 999 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 CATSPER3Q86XQ3 398 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 ERMNQ8TAM6 284 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 PRPF31Q8WWY3 499 aaKnown RBP21.19■□□□□ 0.98
DDX54-208ENST00000551344 POLR3CQ9BUI4 534 aaPredicted RBP21.19■□□□□ 0.98
DDX54-208ENST00000551344 TMEM161AQ9NX61 479 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 COL4A3BPQ9Y5P4 624 aa21.19■□□□□ 0.98
DDX54-208ENST00000551344 DGAT1O75907 488 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
DDX54-208ENST00000551344 PDIA5Q14554 519 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 EMC2Q15006 297 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 PTPROQ16827 1216 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 KSR1Q8IVT5 923 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 TMEM143Q96AN5 459 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 NLRP4Q96MN2 994 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 MTRQ99707 1265 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 PLVAPQ9BX97 442 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 ATP6V0A4Q9HBG4 840 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 IFT122Q9HBG6 1241 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 DACT1Q9NYF0 836 aa21.18■□□□□ 0.98
DDX54-208ENST00000551344 TRANK1O15050 2925 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 PRUNE2Q8WUY3 3088 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 LAD1O00515 517 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
DDX54-208ENST00000551344 MUTP22033 750 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 RPA1P27694 616 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 RARRES1P49788 294 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 FXR2P51116 673 aaKnown RBP eCLIP21.17■□□□□ 0.982e-6■■■■■ 35.1
DDX54-208ENST00000551344 LAMTOR4Q0VGL1 99 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 PTGDRQ13258 359 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 CUL4AQ13619 759 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 MXD4Q14582 209 aaPredicted RBP21.17■□□□□ 0.98
DDX54-208ENST00000551344 RILPL1Q5EBL4 403 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 LARP1BQ659C4 914 aaKnown RBP21.17■□□□□ 0.98
DDX54-208ENST00000551344 SRGAP1Q7Z6B7 1085 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 FERMT3Q86UX7 667 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 PIGOQ8TEQ8 1089 aa21.17■□□□□ 0.98
DDX54-208ENST00000551344 ATXN2LQ8WWM7 1075 aaKnown RBP21.17■□□□□ 0.98
DDX54-208ENST00000551344 MRPL38Q96DV4 380 aaKnown RBP21.17■□□□□ 0.98
DDX54-208ENST00000551344 CCDC43Q96MW1 224 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms