RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 U2AF2P26368 475 aaKnown RBP eCLIP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
LETMD1-221ENST00000550100 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
LETMD1-221ENST00000550100 FAM184AQ8NB25 1140 aa13.23□□□□□ -0.29
LETMD1-221ENST00000550100 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
LETMD1-221ENST00000550100 FDXACB1Q9BRP7 624 aaPredicted RBP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
LETMD1-221ENST00000550100 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
LETMD1-221ENST00000550100 ST18O60284 1047 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 MED24O75448 989 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 TMOD1P28289 359 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 SARSP49591 514 aaKnown RBP13.22□□□□□ -0.29
LETMD1-221ENST00000550100 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
LETMD1-221ENST00000550100 IL17AQ16552 155 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
LETMD1-221ENST00000550100 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 FBXO22Q8NEZ5 403 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 MAP7D2Q96T17 732 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 MINDY3Q9H8M7 445 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
LETMD1-221ENST00000550100 ATG2AQ2TAZ0 1938 aa13.21□□□□□ -0.29
LETMD1-221ENST00000550100 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.29
LETMD1-221ENST00000550100 GPR182O15218 404 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 FGFR1P11362 822 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 GJB2P29033 226 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 TECP42680 631 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 TFF2Q03403 129 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 ECM1Q16610 540 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 TTC38Q5R3I4 469 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 FIBCD1Q8N539 461 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 PIGOQ8TEQ8 1089 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.3
LETMD1-221ENST00000550100 NLRP7Q8WX94 980 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 CLP1Q92989 425 aaKnown RBP13.21□□□□□ -0.3
LETMD1-221ENST00000550100 COL25A1Q9BXS0 654 aaPredicted RBP13.21□□□□□ -0.3
LETMD1-221ENST00000550100 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 IFT122Q9HBG6 1241 aa13.21□□□□□ -0.3
LETMD1-221ENST00000550100 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.3
LETMD1-221ENST00000550100 ARID2Q68CP9 1835 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 KIAA1671Q9BY89 1806 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 H3BNC9 293 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 GRM6O15303 877 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 LYPLA2O95372 231 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-221ENST00000550100 DNAJB1P25685 340 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 BMPR1AP36894 532 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 CAMK1Q14012 370 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
LETMD1-221ENST00000550100 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 CATSPER3Q86XQ3 398 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
LETMD1-221ENST00000550100 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 DLL1O00548 723 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 GPM6BQ13491 265 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 EMC2Q15006 297 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 NLRP4Q96MN2 994 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 UPF2Q9HAU5 1272 aaKnown RBP13.19□□□□□ -0.3
LETMD1-221ENST00000550100 PCDHB7Q9Y5E2 793 aa13.19□□□□□ -0.3
LETMD1-221ENST00000550100 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 C5orf67F2Z3F1 127 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 CTNNB1P35222 781 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 RARRES1P49788 294 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 POLGP54098 1239 aaPredicted RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 PTGDRQ13258 359 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 ZNF598Q86UK7 904 aaKnown RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 CASD1Q96PB1 797 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 POLD4Q9HCU8 107 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 ALG13Q9NP73 1137 aaKnown RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 TCF20Q9UGU0 1960 aaKnown RBP13.18□□□□□ -0.3
LETMD1-221ENST00000550100 RALGAPA2Q2PPJ7 1873 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 NCOR1O75376 2440 aa13.18□□□□□ -0.3
LETMD1-221ENST00000550100 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 STAG3L1P0CL83 205 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
LETMD1-221ENST00000550100 RFC5P40937 340 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 DNM2P50570 870 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 CUL4AQ13619 759 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
LETMD1-221ENST00000550100 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms