RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 ATP5OP48047 213 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 GEN1Q17RS7 908 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 ZNF484Q5JVG2 852 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 GPR101Q96P66 508 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 VCXQ9H320 206 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 FAM96AQ9H5X1 160 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 GGA3Q9NZ52 723 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 PSMD3O43242 534 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 SH3BP5O60239 455 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 ABCB4P21439 1286 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 GABPB1Q06547 395 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 DRP2Q13474 957 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 CUL1Q13616 776 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 UAP1Q16222 522 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 LRRC31Q6UY01 552 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 NIPA1Q7RTP0 329 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 KLHL7Q8IXQ5 586 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 KIRREL3Q8IZU9 778 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 TTC25Q96NG3 672 aa9.95□□□□□ -0.82
PPFIA2-216ENST00000549396 TJP3O95049 919 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 CASP14P31944 242 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 IFRD2Q12894 506 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 NLRP4Q96MN2 994 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 GRID2IPA4D2P6 1211 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 KRT1P04264 644 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 KRT7P08729 469 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 PAX3P23760 479 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 VAMP7P51809 220 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ADKP55263 362 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 RWDD2BP57060 319 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 INHBEP58166 350 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 DUOXA2Q1HG44 320 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ANGEL2Q5VTE6 544 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 NME8Q8N427 588 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 DNERQ8NFT8 737 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 HEXIM2Q96MH2 286 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 APOL6Q9BWW8 343 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 MAGEB5Q9BZ81 275 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ELP3Q9H9T3 547 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 PPANQ9NQ55 473 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ZNF148Q9UQR1 794 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 TXNP10599 105 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ZNF157P51786 506 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 EPHB4P54760 987 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 HMGCS2P54868 508 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 WHAMMQ8TF30 809 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 PRR12Q9ULL5 1215 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 COL14A1Q05707 1796 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 PDHBP11177 359 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 CAP2P40123 477 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 SLC1A1P43005 524 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ILF2Q12905 390 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 NR1H3Q13133 447 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 TWF2Q6IBS0 349 aaKnown RBP9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 OR6B2Q6IFH4 312 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ZBED2Q9BTP6 218 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 ERAP1Q9NZ08 941 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 VPS18Q9P253 973 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 IP6K2Q9UHH9 426 aa9.94□□□□□ -0.82
PPFIA2-216ENST00000549396 FKBP1BP68106 108 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 ZNF677Q86XU0 584 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 FMR1NBQ8N0W7 255 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 GPC2Q8N158 579 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 TRIM56Q9BRZ2 755 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 TUBB6Q9BUF5 446 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 MOV10L1Q9BXT6 1211 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SRGAP2CP0DJJ0 459 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 RALAP11233 206 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 DGKDQ16760 1214 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 ARHGEF18Q6ZSZ5 1173 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 DEFB129Q9H1M3 183 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 AAASQ9NRG9 546 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 CCL15-CCL14A0A0B4J2E2 113 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SMAPO00193 183 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 RARBP10826 455 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 PLS3P13797 630 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 YWHABP31946 246 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 KCNJ6P48051 423 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 MYBPC2Q14324 1141 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 CCL15Q16663 113 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 SWSAP1Q6NVH7 229 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 RNF180Q86T96 592 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 STMN2Q93045 179 aa9.93□□□□□ -0.82
PPFIA2-216ENST00000549396 KIF28PB7ZC32 967 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms