RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SPDYE3A6NKU9 549 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 PBX3P40426 434 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 KRT17Q04695 432 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 DHX32Q7L7V1 743 aaKnown RBP13.88□□□□□ -0.19
DDX54-206ENST00000549271 RAB11FIP4Q86YS3 637 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 CMTR1Q8N1G2 835 aaKnown RBP13.88□□□□□ -0.19
DDX54-206ENST00000549271 FEZF2Q8TBJ5 459 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 TMEM40Q8WWA1 233 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 CASD1Q96PB1 797 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 HINFPQ9BQA5 517 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 DZANK1Q9NVP4 752 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 FBXL21Q9UKT6 434 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 PCDHA6Q9UN73 950 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 PCDHA8Q9Y5H6 950 aa13.88□□□□□ -0.19
DDX54-206ENST00000549271 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 HSPA4P34932 840 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
DDX54-206ENST00000549271 SUMF1Q8NBK3 374 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
DDX54-206ENST00000549271 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
DDX54-206ENST00000549271 ACSF2Q96CM8 615 aaPredicted RBP13.87□□□□□ -0.19
DDX54-206ENST00000549271 KCNK12Q9HB15 430 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 RNF19AQ9NV58 838 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 SPG21Q9NZD8 308 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 ST3GAL5Q9UNP4 418 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 NFASCO94856 1347 aa13.87□□□□□ -0.19
DDX54-206ENST00000549271 KRBA1A5PL33 1030 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 SP9P0CG40 484 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 CPA1P15085 419 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 KRT32Q14532 448 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 UBE2SQ16763 222 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 ST3GAL2Q16842 350 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 PPP1R18Q6NYC8 613 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 SLC39A11Q8N1S5 342 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 MXRA8Q9BRK3 442 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 JPH1Q9HDC5 661 aaPredicted RBP13.86□□□□□ -0.19
DDX54-206ENST00000549271 WNT16Q9UBV4 365 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
DDX54-206ENST00000549271 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 NARSO43776 548 aaKnown RBP13.85□□□□□ -0.19
DDX54-206ENST00000549271 FOSP01100 380 aaPredicted RBP13.85□□□□□ -0.19
DDX54-206ENST00000549271 EPCAMP16422 314 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 ATXN1P54253 815 aaKnown RBP13.85□□□□□ -0.19
DDX54-206ENST00000549271 TBC1D8BQ0IIM8 1120 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 FUT2Q10981 343 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 DSC3Q14574 896 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 PLCB4Q15147 1175 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 APOA5Q6Q788 366 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 MTHFD1LQ6UB35 978 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 OTOP3Q7RTS5 596 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 PLPPR4Q7Z2D5 763 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 LRRC43Q8N309 656 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 SLC22A17Q8WUG5 538 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 RIC8AQ9NPQ8 531 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
DDX54-206ENST00000549271 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
DDX54-206ENST00000549271 DLGAP2Q9P1A6 1054 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 SLC9A2Q9UBY0 812 aa13.85□□□□□ -0.19
DDX54-206ENST00000549271 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 GPR182O15218 404 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 HOXA2O43364 376 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 SDHBP21912 280 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 SLC26A2P50443 739 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 WWC2Q6AWC2 1192 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 TMC5Q6UXY8 1006 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 GPR149Q86SP6 731 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 MICU3Q86XE3 530 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 KIAA0319LQ8IZA0 1049 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
DDX54-206ENST00000549271 GLT8D2Q9H1C3 349 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 AZI2Q9H6S1 392 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 IGSF9Q9P2J2 1179 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 GINS2Q9Y248 185 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 IRAK3Q9Y616 596 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 CNTNAP5Q8WYK1 1306 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 ATRXP46100 2492 aa13.84□□□□□ -0.19
DDX54-206ENST00000549271 MEIS1O00470 390 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 REC8O95072 547 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 ATG7O95352 703 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 CXCL14O95715 111 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
DDX54-206ENST00000549271 HMGB1P09429 215 aaKnown RBP13.83□□□□□ -0.2
DDX54-206ENST00000549271 RCAN1P53805 252 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 ACTR2P61160 394 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
DDX54-206ENST00000549271 KIAA0319Q5VV43 1072 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms