RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 RGS18Q9NS28 235 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 C1orf112Q9NSG2 853 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 LMCD1Q9NZU5 365 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 LRFN2Q9ULH4 789 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 PPME1Q9Y570 386 aa16.91■□□□□ 0.3
NR4A1-212ENST00000549102 SLITRK3O94933 977 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 DARSP14868 501 aaKnown RBP16.9■□□□□ 0.3
NR4A1-212ENST00000549102 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
NR4A1-212ENST00000549102 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
NR4A1-212ENST00000549102 SLC24A5Q71RS6 500 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 OTUD6AQ7L8S5 288 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 TPH2Q8IWU9 490 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
NR4A1-212ENST00000549102 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 SUCLA2Q9P2R7 463 aaPredicted RBP16.9■□□□□ 0.3
NR4A1-212ENST00000549102 KIAA1671Q9BY89 1806 aa16.9■□□□□ 0.3
NR4A1-212ENST00000549102 FNDC1Q4ZHG4 1894 aaPredicted RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 POTEMA6NI47 508 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 C9IYK1 514 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 CTNNB1P35222 781 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 RFC5P40937 340 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 TRAPPC10P48553 1259 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 DSC3Q14574 896 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 ZNF174Q15697 407 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 XKR9Q5GH70 373 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 RHPN2Q8IUC4 686 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 HSD17B14Q9BPX1 270 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 GCOM2Q9BZD3 368 aaPredicted RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 DHX33Q9H6R0 707 aaKnown RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 THEGQ9P2T0 379 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
NR4A1-212ENST00000549102 RWDD3Q9Y3V2 267 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.29
NR4A1-212ENST00000549102 A0A087WZ62 844 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 H3BNC9 293 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 ZBTB39O15060 712 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 LYPLA2O95372 231 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 LINC00271P0C7V0 271 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 ZSCAN20P17040 1043 aaPredicted RBP16.88■□□□□ 0.29
NR4A1-212ENST00000549102 GPM6BQ13491 265 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 SKIV2LQ15477 1246 aaKnown RBP16.88■□□□□ 0.29
NR4A1-212ENST00000549102 PAN2Q504Q3 1202 aaKnown RBP16.88■□□□□ 0.29
NR4A1-212ENST00000549102 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 CLP1Q92989 425 aaKnown RBP16.88■□□□□ 0.29
NR4A1-212ENST00000549102 FDXACB1Q9BRP7 624 aaPredicted RBP16.88■□□□□ 0.29
NR4A1-212ENST00000549102 CUL9Q8IWT3 2517 aa16.88■□□□□ 0.29
NR4A1-212ENST00000549102 C5orf67F2Z3F1 127 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 CSDE1O75534 798 aaKnown RBP16.87■□□□□ 0.29
NR4A1-212ENST00000549102 FGFR4P22455 802 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 BMPR1AP36894 532 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 GATMP50440 423 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 EMC2Q15006 297 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 TMEM143Q96AN5 459 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 NLRP4Q96MN2 994 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
NR4A1-212ENST00000549102 TMEM161AQ9NX61 479 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
NR4A1-212ENST00000549102 MRPL42Q9Y6G3 142 aaKnown RBP16.87■□□□□ 0.29
NR4A1-212ENST00000549102 DLL1O00548 723 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 GAS2O43903 313 aaKnown RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 RB1P06400 928 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 SFPQP23246 707 aaKnown RBP eCLIP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 GJB2P29033 226 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 TECP42680 631 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 FAM189BP81408 668 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 NBR1Q14596 966 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 PTPROQ16827 1216 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 ATXN2LQ8WWM7 1075 aaKnown RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 PSPC1Q8WXF1 523 aaKnown RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 MRPL38Q96DV4 380 aaKnown RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 MTRQ99707 1265 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 C11orf84Q9BUA3 381 aaPredicted RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 BACH2Q9BYV9 841 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 ELAC1Q9H777 363 aaKnown RBP16.86■□□□□ 0.29
NR4A1-212ENST00000549102 ATP6V0A4Q9HBG4 840 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 ANKEF1Q9NU02 776 aa16.86■□□□□ 0.29
NR4A1-212ENST00000549102 FAM102BQ5T8I3 360 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 MCTP1Q6DN14 999 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 PRPF31Q8WWY3 499 aaKnown RBP16.85■□□□□ 0.29
NR4A1-212ENST00000549102 CCDC43Q96MW1 224 aaKnown RBP16.85■□□□□ 0.29
NR4A1-212ENST00000549102 PLVAPQ9BX97 442 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 TUFT1Q9NNX1 390 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 ATG2AQ2TAZ0 1938 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 BRWD1Q9NSI6 2320 aa16.85■□□□□ 0.29
NR4A1-212ENST00000549102 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
NR4A1-212ENST00000549102 SPATA31C1P0DKV0 1188 aa16.84■□□□□ 0.29
NR4A1-212ENST00000549102 FGFR1P11362 822 aa16.84■□□□□ 0.29
NR4A1-212ENST00000549102 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms