RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZMYM2Q9UBW7 1377 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 GOLGA6L7A0A1B0GV03 622 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 SMIM23A6NLE4 172 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 SLC16A3O15427 465 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 UBAP2Q5T6F2 1119 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 AGBL2Q5U5Z8 902 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 MYCT1Q8N699 235 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 CCDC114Q96M63 670 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 PSMD1Q99460 953 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 EIF2AK1Q9BQI3 630 aaKnown RBP15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 THAP2Q9H0W7 228 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 SLC40A1Q9NP59 571 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 VAV3Q9UKW4 847 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 PNMA2Q9UL42 364 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 RABGAP1Q9Y3P9 1069 aa15.35■□□□□ 0.05
RAPGEF3-218ENST00000548919 SMCHD1A6NHR9 2005 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 SPDYE3A6NKU9 549 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 CHMP2AO43633 222 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 SERPINB2P05120 415 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 DR1Q01658 176 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 ARHGAP44Q17R89 818 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 BMT2Q1RMZ1 405 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 RINT1Q6NUQ1 792 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 CERKQ8TCT0 537 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 YY1AP1Q9H869 796 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 FAM114A2Q9NRY5 505 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 KLC4Q9NSK0 619 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 CHORDC1Q9UHD1 332 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 COG5Q9UP83 839 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 SRRM3A6NNA2 597 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 HLA-DOAP06340 250 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 CYP2J2P51589 502 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 Q4G0T1 1027 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 RFFLQ8WZ73 363 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 ALG3Q92685 438 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 GGA2Q9UJY4 613 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 INTUQ9ULD6 942 aa15.34■□□□□ 0.05
RAPGEF3-218ENST00000548919 KDM4FA0A1W2PPD8 638 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 LRRN2O75325 713 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 SMTNP53814 917 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PLTPP55058 493 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 NPEPPSP55786 919 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 TPH2Q8IWU9 490 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 RDH13Q8NBN7 331 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 CTNNBL1Q8WYA6 563 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 GLT8D2Q9H1C3 349 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 EPB41L4BQ9H329 900 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 SNX24Q9Y343 169 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 TLDC2A0PJX2 215 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 UBAP1LF5GYI3 381 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PPFIA2O75334 1257 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 RASSF9O75901 435 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 FMO5P49326 533 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PTENP60484 403 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 SETQ01105 290 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PPATQ06203 517 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PDE4CQ08493 712 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 PLS1Q14651 629 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 SIAH1Q8IUQ4 282 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 UHMK1Q8TAS1 419 aaKnown RBP15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 NCAPGQ9BPX3 1015 aa15.33■□□□□ 0.04
RAPGEF3-218ENST00000548919 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 BBOX1O75936 387 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 FAM13AO94988 1023 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 ANXA13P27216 316 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 PSMC2P35998 433 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 ANKRD20A8PQ5CZ79 823 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 APOBEC3HQ6NTF7 200 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 CACNA2D3Q8IZS8 1091 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 TATDN2Q93075 761 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 STK33Q9BYT3 514 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 TXLNGYQ9BZA5 131 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZDHHC18Q9NUE0 388 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 NCANO14594 1321 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 SLC26A4O43511 780 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 EYA4O95677 639 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 KRT13P13646 458 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 LMNB1P20700 586 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZNF76P36508 570 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 MOXD1Q6UVY6 613 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 C18orf8Q96DM3 657 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 ERP44Q9BS26 406 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 AMNQ9BXJ7 453 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 DAAM1Q9Y4D1 1078 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 TAF1LQ8IZX4 1826 aa15.32■□□□□ 0.04
RAPGEF3-218ENST00000548919 DDTLA6NHG4 134 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 TMEM110-MUSTN1A8MSY1 372 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms