RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 GATMP50440 423 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 EMC2Q15006 297 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 PAN2Q504Q3 1202 aaKnown RBP17.63■□□□□ 0.41
DDX54-205ENST00000548786 OTUD6AQ7L8S5 288 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
DDX54-205ENST00000548786 HSD17B14Q9BPX1 270 aa17.63■□□□□ 0.41
DDX54-205ENST00000548786 FDXACB1Q9BRP7 624 aaPredicted RBP17.63■□□□□ 0.41
DDX54-205ENST00000548786 TSPYL2Q9H2G4 693 aaPredicted RBP17.63■□□□□ 0.41
DDX54-205ENST00000548786 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
DDX54-205ENST00000548786 MED24O75448 989 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 DARSP14868 501 aaKnown RBP17.62■□□□□ 0.41
DDX54-205ENST00000548786 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
DDX54-205ENST00000548786 PTGDRQ13258 359 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 CUL4AQ13619 759 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 POTEGQ6S5H5 508 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 C4orf32Q8N8J7 132 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 SLC17A8Q8NDX2 589 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 LRFN2Q9ULH4 789 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 REV3LO60673 3130 aa17.62■□□□□ 0.41
DDX54-205ENST00000548786 SRGAP2CP0DJJ0 459 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 SPATA31C1P0DKV0 1188 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 RFC5P40937 340 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 GRB10Q13322 594 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
DDX54-205ENST00000548786 FERMT3Q86UX7 667 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 NEK9Q8TD19 979 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
DDX54-205ENST00000548786 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
DDX54-205ENST00000548786 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
DDX54-205ENST00000548786 GCOM2Q9BZD3 368 aaPredicted RBP17.61■□□□□ 0.41
DDX54-205ENST00000548786 ADGRA3Q8IWK6 1321 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 UNC80Q8N2C7 3258 aa17.61■□□□□ 0.41
DDX54-205ENST00000548786 TTC3P53804 2025 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 USO1O60763 962 aaKnown RBP17.6■□□□□ 0.41
DDX54-205ENST00000548786 ERVK-21P61565 698 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 BTG3Q14201 252 aaPredicted RBP17.6■□□□□ 0.41
DDX54-205ENST00000548786 ODR4Q5SWX8 454 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 MAEAQ7L5Y9 396 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 NPAS4Q8IUM7 802 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 RNF169Q8NCN4 708 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 FBXO22Q8NEZ5 403 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 ERMNQ8TAM6 284 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 MTRQ99707 1265 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
DDX54-205ENST00000548786 COL4A3BPQ9Y5P4 624 aa17.6■□□□□ 0.41
DDX54-205ENST00000548786 COL4A6Q14031 1691 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 PP2D1A8MPX8 630 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
DDX54-205ENST00000548786 CSPG5O95196 566 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 LYPLA2O95372 231 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 CCT6AP40227 531 aaKnown RBP17.59■□□□□ 0.41
DDX54-205ENST00000548786 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
DDX54-205ENST00000548786 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 PSPC1Q8WXF1 523 aaKnown RBP17.59■□□□□ 0.41
DDX54-205ENST00000548786 XPNPEP1Q9NQW7 623 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 RGS18Q9NS28 235 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 ANKEF1Q9NU02 776 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 LRWD1Q9UFC0 647 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 PCDHB7Q9Y5E2 793 aa17.59■□□□□ 0.41
DDX54-205ENST00000548786 A0A0C4DFX4 3053 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 K7ELQ4 463 aaPredicted RBP17.58■□□□□ 0.4
DDX54-205ENST00000548786 LPXNO60711 386 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 DGKIO75912 1065 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 STAG3L1P0CL83 205 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 FGFR1P11362 822 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.4
DDX54-205ENST00000548786 CDC25AP30304 524 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 CTNNB1P35222 781 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 RARRES1P49788 294 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 FXR2P51116 673 aaKnown RBP eCLIP17.58■□□□□ 0.42e-7■■□□□ 12.2
DDX54-205ENST00000548786 DSC3Q14574 896 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 IL17AQ16552 155 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 RILPL1Q5EBL4 403 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 FAM102BQ5T8I3 360 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 SLC24A5Q71RS6 500 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 POLR3CQ9BUI4 534 aaPredicted RBP17.58■□□□□ 0.4
DDX54-205ENST00000548786 RC3H2Q9HBD1 1191 aaKnown RBP17.58■□□□□ 0.4
DDX54-205ENST00000548786 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 TUFT1Q9NNX1 390 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.58■□□□□ 0.4
DDX54-205ENST00000548786 C1orf112Q9NSG2 853 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 PPME1Q9Y570 386 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 NLRC5Q86WI3 1866 aa17.58■□□□□ 0.4
DDX54-205ENST00000548786 TBKBP1A7MCY6 615 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 C9IYK1 514 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 SFPQP23246 707 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX54-205ENST00000548786 SKIV2LQ15477 1246 aaKnown RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 ECM1Q16610 540 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 LONRF3Q496Y0 759 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 CATSPER4Q7RTX7 472 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 ZNF410Q86VK4 478 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 TMEM192Q8IY95 271 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 EXOC8Q8IYI6 725 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms