RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 EIF4BP23588 611 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 ADAM15Q13444 863 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 DRP2Q13474 957 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 SMAD4Q13485 552 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 SMAD2Q15796 467 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 INF2Q27J81 1249 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 COLGALT1Q8NBJ5 622 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 PPP2R3CQ969Q6 453 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 PHF20Q9BVI0 1012 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 CWH43Q9H720 699 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 ATP6V0A4Q9HBG4 840 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 DDX25Q9UHL0 483 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 C5orf42Q9H799 3197 aa19.59■□□□□ 0.73
CHMP1A-205ENST00000548650 C19orf67A6NJJ6 358 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 MBTPS2O43462 519 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 GPR37L1O60883 481 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 CDKL5O76039 1030 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 UBE3AQ05086 875 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 MTERF2Q49AM1 385 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 XKR3Q5GH77 459 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 ADHFE1Q8IWW8 467 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 EFHBQ8N7U6 833 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 MSLNLQ96KJ4 702 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 NIFKQ9BYG3 293 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 TMEM117Q9H0C3 514 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 AAASQ9NRG9 546 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 TYW1Q9NV66 732 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 TPCN1Q9ULQ1 816 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 PCDHB12Q9Y5F1 795 aa19.58■□□□□ 0.72
CHMP1A-205ENST00000548650 IGKV6-21A0A0C4DH24 114 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 FGF18O76093 207 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 GLP2RO95838 553 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 NEFLP07196 543 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 LAG3P18627 525 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 NRIP1P48552 1158 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 NDUFV1P49821 464 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 SPOUT1Q5T280 376 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 SCLT1Q96NL6 688 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 KCNMB3Q9NPA1 279 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 TLR9Q9NR96 1032 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 CD207Q9UJ71 328 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 VAV3Q9UKW4 847 aa19.57■□□□□ 0.72
CHMP1A-205ENST00000548650 HOXA2O43364 376 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 PFKFB2O60825 505 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 DTNBO60941 627 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 FGFR4P22455 802 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 CSPP1Q1MSJ5 1256 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 LETM2Q2VYF4 491 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 ECHDC2Q86YB7 292 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 THNSL1Q8IYQ7 743 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 LRRC43Q8N309 656 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 CASD1Q96PB1 797 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 SH2D3AQ9BRG2 576 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 GJB4Q9NTQ9 266 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 CLEC1BQ9P126 229 aa19.56■□□□□ 0.72
CHMP1A-205ENST00000548650 CCDC194A0A1B0GVG4 234 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 EML1O00423 815 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 FSCN2O14926 492 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 CTDNEP1O95476 244 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 ZSCAN20P17040 1043 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 ATF7P17544 494 aaPredicted RBP19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 PPP2R5CQ13362 524 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 CLLU1OSQ5K130 101 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 LRRC55Q6ZSA7 311 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 ANO5Q75V66 913 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 NEK8Q86SG6 692 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 RBM23Q86U06 439 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 ZNF598Q86UK7 904 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 SMRP1Q8NCR6 262 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 OXER1Q8TDS5 423 aa19.55■□□□□ 0.72
CHMP1A-205ENST00000548650 CSDE1O75534 798 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 EYA4O95677 639 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 GCFC2P16383 781 aaKnown RBP19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 ANAPC15P60006 121 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 ERVFC1P60507 584 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 PSMC5P62195 406 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 PLA2G4FQ68DD2 849 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 PPP4R3AQ6IN85 833 aa19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 BARX2Q9UMQ3 279 aaPredicted RBP19.54■□□□□ 0.72
CHMP1A-205ENST00000548650 A0A0U1RQF3 1178 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 DCXO43602 365 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 MAFO75444 373 aaPredicted RBP19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 ALADP13716 330 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 PLA2G5P39877 138 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 AK2P54819 239 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 COASYQ13057 564 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 ABI1Q8IZP0 508 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 RNF169Q8NCN4 708 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 VN1R2Q8NFZ6 395 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 FAM20AQ96MK3 541 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 POP1Q99575 1024 aaKnown RBP19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 GCOM2Q9BZD3 368 aaPredicted RBP19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 WRAP73Q9P2S5 460 aaPredicted RBP19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 LZTS1Q9Y250 596 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 HCN4Q9Y3Q4 1203 aa19.53■□□□□ 0.72
CHMP1A-205ENST00000548650 MUC6Q6W4X9 2439 aa19.52■□□□□ 0.72
CHMP1A-205ENST00000548650 A0A087WZ62 844 aa19.52■□□□□ 0.72
CHMP1A-205ENST00000548650 FAM205CA6NFA0 338 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms