RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 ECM1Q16610 540 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 PPP1R15BQ5SWA1 713 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 DTHD1Q6ZMT9 781 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 OTUD6AQ7L8S5 288 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 TMCO2Q7Z6W1 182 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 ERMNQ8TAM6 284 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 OSMRQ99650 979 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 POLR3CQ9BUI4 534 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 IFIH1Q9BYX4 1025 aaKnown RBP9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 TUFT1Q9NNX1 390 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 LHX6Q9UPM6 363 aa9.93□□□□□ -0.82
SMARCC2-205ENST00000548130 MYH9P35579 1960 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 IGKV6-21A0A0C4DH24 114 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 ABHD14A-ACY1A0A1B0GW23 586 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 VWA3AA6NCI4 1184 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 GPR32O75388 356 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 MAFO75444 373 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 MYOGP15173 224 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 POLGP54098 1239 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 NLRP11P59045 1033 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 SMAD3P84022 425 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 CEBPZQ03701 1054 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 EMC2Q15006 297 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 HAUS3Q68CZ6 603 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 FAM117BQ6P1L5 589 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 TSHZ1Q6ZSZ6 1077 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 IGSF22Q8N9C0 903 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 SNX29Q8TEQ0 813 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 TMEM143Q96AN5 459 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 SCLT1Q96NL6 688 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 PBX4Q9BYU1 374 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 RAB34Q9BZG1 259 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 ADAMTS10Q9H324 1103 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 DHX33Q9H6R0 707 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 ANKEF1Q9NU02 776 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 SUCLA2Q9P2R7 463 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 NOC2LQ9Y3T9 749 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 CLIC4Q9Y696 253 aa9.92□□□□□ -0.82
SMARCC2-205ENST00000548130 TANC1Q9C0D5 1861 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RANBP2P49792 3224 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 USO1O60763 962 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RPS6KA5O75582 802 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 BMP15O95972 392 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 DNAJB2P25686 324 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RPA1P27694 616 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RFC5P40937 340 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RARRES1P49788 294 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 DNM2P50570 870 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 GPC3P51654 580 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 CRYBB1P53674 252 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 GRIN1Q05586 938 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 NFX1Q12986 1120 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 PAK2Q13177 524 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 PKP1Q13835 747 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 PDIA5Q14554 519 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 FOXD4L6Q3SYB3 417 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 KRT79Q5XKE5 535 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 FOXD4L3Q6VB84 417 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 Q7L0L9 218 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 MAEAQ7L5Y9 396 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 FAM228AQ86W67 206 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 RHPN2Q8IUC4 686 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 KSR1Q8IVT5 923 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 HERC6Q8IVU3 1022 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 MYOCDQ8IZQ8 938 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 NLRP7Q8WX94 980 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 SLC7A3Q8WY07 619 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 APBB2Q92870 758 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 NLRP4Q96MN2 994 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 CCDC43Q96MW1 224 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 NACC1Q96RE7 527 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 USP28Q96RU2 1077 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 SLC9A7Q96T83 725 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 JPH2Q9BR39 696 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 ZSCAN16Q9H4T2 348 aaPredicted RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 XPNPEP1Q9NQW7 623 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 PADI3Q9ULW8 664 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 KIAA1024Q9UPX6 916 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 YBX2Q9Y2T7 364 aaKnown RBP9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
SMARCC2-205ENST00000548130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 ARHGEF35A5YM69 484 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 EFCAB14O75071 495 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 CSDE1O75534 798 aaKnown RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 AMHP03971 560 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 ZSCAN22P10073 491 aaPredicted RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 XRCC6P12956 609 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 FGFR4P22455 802 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 BECN1Q14457 450 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 PTPAQ15257 358 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 ARL6IP4Q66PJ3 421 aaKnown RBP9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 USP38Q8NB14 1042 aa9.9□□□□□ -0.82
SMARCC2-205ENST00000548130 PHOSPHO2Q8TCD6 241 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms