RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 STK17AQ9UEE5 414 aa19.33■□□□□ 0.68
HDAC7-227ENST00000548080 COL1A2P08123 1366 aa19.33■□□□□ 0.68
HDAC7-227ENST00000548080 PITPNM1O00562 1244 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 GTPBP6O43824 516 aaPredicted RBP19.32■□□□□ 0.68
HDAC7-227ENST00000548080 CLCN3P51790 818 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 MBTPS1Q14703 1052 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 NT5DC1Q5TFE4 455 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 HAUS3Q68CZ6 603 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 LRRC71Q8N4P6 559 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 LRRC15Q8TF66 581 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 SMARCE1Q969G3 411 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 VWCEQ96DN2 955 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 NT5C3AQ9H0P0 336 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 PRO3102Q9H379 93 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 ARID2Q68CP9 1835 aa19.32■□□□□ 0.68
HDAC7-227ENST00000548080 SPATA31C1P0DKV0 1188 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 SARSP49591 514 aaKnown RBP19.31■□□□□ 0.68
HDAC7-227ENST00000548080 MRE11P49959 708 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 NLRP12P59046 1061 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 DPYDQ12882 1025 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 PPIGQ13427 754 aaKnown RBP eCLIP19.31■□□□□ 0.688e-6■■■■□ 22.7
HDAC7-227ENST00000548080 ECM1Q16610 540 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 L1TD1Q5T7N2 865 aaKnown RBP19.31■□□□□ 0.68
HDAC7-227ENST00000548080 METTL13Q8N6R0 699 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 PIGOQ8TEQ8 1089 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 MTRQ99707 1265 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 HSD17B14Q9BPX1 270 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 ZSWIM4Q9H7M6 989 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 GRPEL1Q9HAV7 217 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 PCDHA2Q9Y5H9 948 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 LOXHD1Q8IVV2 1947 aa19.31■□□□□ 0.68
HDAC7-227ENST00000548080 BIN1O00499 593 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 CAVIN2O95810 425 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 RPA1P27694 616 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 RBL2Q08999 1139 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 GPNMBQ14956 572 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 SHHQ15465 462 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 TARBP2Q15633 366 aaKnown RBP19.3■□□□□ 0.68
HDAC7-227ENST00000548080 ANO6Q4KMQ2 910 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 CATSPER3Q86XQ3 398 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 SPATA20Q8TB22 786 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 STAMQ92783 540 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 ZNF668Q96K58 619 aaPredicted RBP19.3■□□□□ 0.68
HDAC7-227ENST00000548080 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.3■□□□□ 0.687e-8■■■■■ 32.7
HDAC7-227ENST00000548080 POLR3CQ9BUI4 534 aaPredicted RBP19.3■□□□□ 0.68
HDAC7-227ENST00000548080 IL23AQ9NPF7 189 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 BLOC1S4Q9NUP1 217 aa19.3■□□□□ 0.68
HDAC7-227ENST00000548080 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 NBNO60934 754 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 MYL1P05976 194 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
HDAC7-227ENST00000548080 AMPD3Q01432 767 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 TCTN1Q2MV58 587 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 TAF2Q6P1X5 1199 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 SV2BQ7L1I2 683 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 C4orf19Q8IY42 314 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 RAD54LQ92698 747 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 CEP170P1Q96L14 293 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 CEP89Q96ST8 783 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 NIFKQ9BYG3 293 aaKnown RBP19.29■□□□□ 0.68
HDAC7-227ENST00000548080 SUGCTQ9HAC7 445 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 KIAA1024Q9UPX6 916 aa19.29■□□□□ 0.68
HDAC7-227ENST00000548080 CHRNA1P02708 482 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 VTNP04004 478 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 CASP1P29466 404 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 TBC1D8BQ0IIM8 1120 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 DRP2Q13474 957 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 XKR9Q5GH70 373 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 TMEM240Q5SV17 173 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 EFCAB12Q6NXP0 572 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 KIAA0319LQ8IZA0 1049 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 KCTD17Q8N5Z5 321 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 TRIML1Q8N9V2 468 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 RNF214Q8ND24 703 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 LARP4BQ92615 738 aaKnown RBP19.28■□□□□ 0.68
HDAC7-227ENST00000548080 GSDMAQ96QA5 445 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 DNAJC25Q9H1X3 360 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 BLZF1Q9H2G9 400 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 TUFT1Q9NNX1 390 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 CYP26B1Q9NR63 512 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 MAN1B1Q9UKM7 699 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 GINS2Q9Y248 185 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 CDY2AQ9Y6F7 541 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 SMIM35A0A1B0GVV1 85 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 DKC1O60832 514 aaKnown RBP eCLIP19.28■□□□□ 0.68
HDAC7-227ENST00000548080 BMP8BP34820 402 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 MRPS6P82932 125 aaKnown RBP19.28■□□□□ 0.68
HDAC7-227ENST00000548080 CUL4BQ13620 913 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 ISM2Q6H9L7 571 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 OTOP2Q7RTS6 562 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 KCNK18Q7Z418 384 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 RSPH3Q86UC2 560 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 FAM200AQ8TCP9 573 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 NEK9Q8TD19 979 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 C7orf25Q9BPX7 421 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 LRRC27Q9C0I9 530 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms