RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 TNFAIP2Q03169 654 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 NR1I3Q14994 352 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 TARBP2Q15633 366 aaKnown RBP13.62□□□□□ -0.23
RAB5B-204ENST00000548068 CCDC144BQ3MJ40 725 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 CCDC40Q4G0X9 1142 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 LRRC55Q6ZSA7 311 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
RAB5B-204ENST00000548068 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 SYCP3Q8IZU3 236 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 OR6J1Q8NGC5 347 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 NAP1L5Q96NT1 182 aaPredicted RBP13.62□□□□□ -0.23
RAB5B-204ENST00000548068 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 TUBGCP2Q9BSJ2 902 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 STRA6Q9BX79 667 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 GJD2Q9UKL4 321 aa13.62□□□□□ -0.23
RAB5B-204ENST00000548068 COL1A2P08123 1366 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 LGALS16A8MUM7 142 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 SLC16A3O15427 465 aaKnown RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PPFIA4O75335 1185 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 MAFO75444 373 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 LGALS2P05162 132 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 TPM1P09493 284 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 HOXD8P13378 290 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 SMPD1P17405 629 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 CYP2B6P20813 491 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 NR2F2P24468 414 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 DNM2P50570 870 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PEX3P56589 373 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 GTF2BQ00403 316 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 TBC1D8BQ0IIM8 1120 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 TRIM14Q14142 442 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 MYBPC2Q14324 1141 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 MAN2A1Q16706 1144 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 DGKDQ16760 1214 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 MFSD14CQ5VZR4 134 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 HAUS6Q7Z4H7 955 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
RAB5B-204ENST00000548068 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 XPNPEP1Q9NQW7 623 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 Q9Y3F1 56 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 PHLPP2Q6ZVD8 1323 aa13.61□□□□□ -0.23
RAB5B-204ENST00000548068 ZMYM2Q9UBW7 1377 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 SIP14410 1827 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 CCDC169A6NNP5 214 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 PES1O00541 588 aaKnown RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 NR3C1P04150 777 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 NPTX2P47972 431 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 SP3Q02447 781 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 ADAM9Q13443 819 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 HSP90AA2PQ14568 343 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 ZNF484Q5JVG2 852 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 CCDC186Q7Z3E2 898 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 AFG1LQ8WV93 481 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 NTPCRQ9BSD7 190 aaKnown RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 NOC4LQ9BVI4 516 aaKnown RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 VPS16Q9H269 839 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 METTL14Q9HCE5 456 aaKnown RBP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 POLD4Q9HCU8 107 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 GPRC5CQ9NQ84 441 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 INTS13Q9NVM9 706 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 FAM184BQ9ULE4 1060 aa13.6□□□□□ -0.23
RAB5B-204ENST00000548068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAB5B-204ENST00000548068 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-204ENST00000548068 A0A1W2PQC6 194 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 SLC16A4O15374 487 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 MMP3P08254 477 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 ZNF865P0CJ78 1059 aaPredicted RBP13.59□□□□□ -0.23
RAB5B-204ENST00000548068 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
RAB5B-204ENST00000548068 PTGS1P23219 599 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 MARK3P27448 753 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 HOXD10P28358 340 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 HOXD13P35453 343 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 NAMPTP43490 491 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 UBXN1Q04323 297 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 IER5Q5VY09 327 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 TRIM50Q86XT4 487 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 RETREG2Q8NC44 543 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 TMEM161BQ8NDZ6 487 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 TMEM174Q8WUU8 243 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 KCNN1Q92952 543 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms