RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
TROAP-206ENST00000547923 GPC3P51654 580 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
TROAP-206ENST00000547923 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
TROAP-206ENST00000547923 BHMT2Q9H2M3 363 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 DHX33Q9H6R0 707 aaKnown RBP11.19□□□□□ -0.62
TROAP-206ENST00000547923 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
TROAP-206ENST00000547923 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 PADI3Q9ULW8 664 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 DNM3Q9UQ16 869 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 COL4A3BPQ9Y5P4 624 aa11.19□□□□□ -0.62
TROAP-206ENST00000547923 A0A087WZ62 844 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 IGKV6-21A0A0C4DH24 114 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 DENND3A2RUS2 1198 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 GPR182O15218 404 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 GPR32O75388 356 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 CSDE1O75534 798 aaKnown RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 SRGAP2CP0DJJ0 459 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 XRCC6P12956 609 aaKnown RBP eCLIP11.18□□□□□ -0.62
TROAP-206ENST00000547923 DNAJB2P25686 324 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 ANP32AP39687 249 aaKnown RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 TXLNAP40222 546 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 RABGGTBP53611 331 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 DEFB103AP81534 67 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 SMAD3P84022 425 aaKnown RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 CDC42EP1Q00587 391 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 ECM1Q16610 540 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 FAM102BQ5T8I3 360 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 RASIP1Q5U651 963 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.18□□□□□ -0.62
TROAP-206ENST00000547923 CABP7Q86V35 215 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 KSR1Q8IVT5 923 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 ZNF710Q8N1W2 664 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 LINC01465Q8N7H1 131 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 TMEM40Q8WWA1 233 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 PRPF31Q8WWY3 499 aaKnown RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 AK8Q96MA6 479 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 FDXACB1Q9BRP7 624 aaPredicted RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 NT5C3AQ9H0P0 336 aa11.18□□□□□ -0.62
TROAP-206ENST00000547923 NOC2LQ9Y3T9 749 aaKnown RBP11.18□□□□□ -0.62
TROAP-206ENST00000547923 E9PMD0 336 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 TLL1O43897 1013 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 MUTP22033 750 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 LONP1P36776 959 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 PBX2P40425 430 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 GRIN1Q05586 938 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 RAB30Q15771 203 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 HERC6Q8IVU3 1022 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 MCPH1Q8NEM0 835 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 FTHL17Q9BXU8 183 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 PBX4Q9BYU1 374 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 CSRNP2Q9H175 543 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 ADAMTS10Q9H324 1103 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 DBR1Q9UK59 544 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 SQORQ9Y6N5 450 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 SIP14410 1827 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 DARSP14868 501 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 FGFR4P22455 802 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
TROAP-206ENST00000547923 LAMTOR4Q0VGL1 99 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 TFDP1Q14186 410 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 DHX8Q14562 1220 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 PTPAQ15257 358 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 ZNF410Q86VK4 478 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 FAM228AQ86W67 206 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 PHOSPHO2Q8TCD6 241 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 TIFAQ96CG3 184 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 MMTAG2Q9BU76 263 aaKnown RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 INO80BQ9C086 356 aaPredicted RBP11.17□□□□□ -0.62
TROAP-206ENST00000547923 SLC28A3Q9HAS3 691 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 XPNPEP1Q9NQW7 623 aa11.17□□□□□ -0.62
TROAP-206ENST00000547923 LOXHD1Q8IVV2 1947 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 SPTLC2O15270 562 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 MYOGP15173 224 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 ZSCAN20P17040 1043 aaPredicted RBP11.16□□□□□ -0.62
TROAP-206ENST00000547923 PHKA2P46019 1235 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
TROAP-206ENST00000547923 CATSPER4Q7RTX7 472 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 CLIC6Q96NY7 704 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 YME1L1Q96TA2 773 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
TROAP-206ENST00000547923 FBXO2Q9UK22 296 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms