RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 COL1A2P08123 1366 aa14.52□□□□□ -0.08
SCAF11-208ENST00000546534 ZBTB42B2RXF5 422 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 BACH1O14867 736 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 HOXA2O43364 376 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 GPR32O75388 356 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 VTNP04004 478 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 RXRAP19793 462 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 ZNF484Q5JVG2 852 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 CWF19L1Q69YN2 538 aaKnown RBP14.52□□□□□ -0.09
SCAF11-208ENST00000546534 ABHD15Q6UXT9 468 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 CCDC60Q8IWA6 550 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-208ENST00000546534 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 TDRD5Q8NAT2 981 aaKnown RBP14.52□□□□□ -0.09
SCAF11-208ENST00000546534 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 AGO4Q9HCK5 861 aaKnown RBP14.52□□□□□ -0.09
SCAF11-208ENST00000546534 MYO10Q9HD67 2058 aa14.52□□□□□ -0.09
SCAF11-208ENST00000546534 DDX39AO00148 427 aaKnown RBP14.51□□□□□ -0.09
SCAF11-208ENST00000546534 PI15O43692 258 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 C22orf31O95567 290 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 ATP4AP20648 1035 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 CEP55Q53EZ4 464 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 FAM160B1Q5W0V3 765 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 PDXDC2PQ6P474 469 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 HEATR3Q7Z4Q2 680 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 ABI1Q8IZP0 508 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 SLC39A11Q8N1S5 342 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 PGBD1Q96JS3 809 aa14.51□□□□□ -0.09
SCAF11-208ENST00000546534 DBR1Q9UK59 544 aaKnown RBP14.51□□□□□ -0.09
SCAF11-208ENST00000546534 NT5C1B-RDH14C9J2C7 533 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 MEIS1O00470 390 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 CXCL14O95715 111 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 NPR3P17342 541 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 CA8P35219 290 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 CLLU1OSQ5K130 101 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 ATAT1Q5SQI0 421 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 KIAA1841Q6NSI8 718 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 SWSAP1Q6NVH7 229 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 NFXL1Q6ZNB6 911 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 ECHDC2Q86YB7 292 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 RAB11FIP4Q86YS3 637 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 RNF169Q8NCN4 708 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 FEZF2Q8TBJ5 459 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 ZNF302Q9NR11 478 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 USTQ9Y2C2 406 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 DMDP11532 3685 aa14.5□□□□□ -0.09
SCAF11-208ENST00000546534 CCDC69A6NI79 296 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 PRC1O43663 620 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 EOMESO95936 686 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 GSPT1P15170 499 aaKnown RBP14.49□□□□□ -0.09
SCAF11-208ENST00000546534 EPCAMP16422 314 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 AOC1P19801 751 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
SCAF11-208ENST00000546534 CASC1Q6TDU7 716 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 CCDC105Q8IYK2 499 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 METTL13Q8N6R0 699 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 RUFY2Q8WXA3 655 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 AUTS2Q8WXX7 1259 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 CYP26B1Q9NR63 512 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 DZANK1Q9NVP4 752 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 CACNA1AO00555 2505 aa14.49□□□□□ -0.09
SCAF11-208ENST00000546534 SH2B2O14492 632 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 DHX15O43143 795 aaKnown RBP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 CHMLP26374 656 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 CLCN3P51790 818 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 NLRP11P59045 1033 aaKnown RBP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 ANGPT1Q15389 498 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 TYW1BQ6NUM6 668 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 MIS18BP1Q6P0N0 1132 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 TMC5Q6UXY8 1006 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 TMTC3Q6ZXV5 915 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 TRMT1LQ7Z2T5 733 aaKnown RBP14.48□□□□□ -0.09
SCAF11-208ENST00000546534 CKAP2LQ8IYA6 745 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 VPS52Q8N1B4 723 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 TMTC2Q8N394 836 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 HELQQ8TDG4 1101 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 ANO3Q9BYT9 981 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 ADAMTS10Q9H324 1103 aa14.48□□□□□ -0.09
SCAF11-208ENST00000546534 DCHS1Q96JQ0 3298 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 FOSP01100 380 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 CALM1P0DP23 149 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 CALM2P0DP24 149 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 CALM3P0DP25 149 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 ALDH7A1P49419 539 aaKnown RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 BCAR1P56945 870 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 AAMPQ13685 434 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 ZNF598Q86UK7 904 aaKnown RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 DTWD2Q8NBA8 298 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 SLC22A17Q8WUG5 538 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 MAP4K1Q92918 833 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 TMEM169Q96HH4 297 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 ZNF668Q96K58 619 aaPredicted RBP14.47□□□□□ -0.09
SCAF11-208ENST00000546534 ZBP1Q9H171 429 aa14.47□□□□□ -0.09
SCAF11-208ENST00000546534 RIC8AQ9NPQ8 531 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms