RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KIF28PB7ZC32 967 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 M0R082 166 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 STAM2O75886 525 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 ALBP02768 609 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 MYCLP12524 364 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 MRPS9P82933 396 aaKnown RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 STXBP2Q15833 593 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 PCSK7Q16549 785 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 INF2Q27J81 1249 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 PIK3AP1Q6ZUJ8 805 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 EEPD1Q7L9B9 569 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 VSIG10LQ86VR7 867 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 NOSTRINQ8IVI9 506 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 TRPV1Q8NER1 839 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 ZNF417Q8TAU3 575 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 TBCKQ8TEA7 893 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 CRYGNQ8WXF5 182 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 INPP4AQ96PE3 977 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 ZNF587Q96SQ5 575 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 MKNK1Q9BUB5 465 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 FOXP1Q9H334 677 aaPredicted RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 SLC6A14Q9UN76 642 aa7.19□□□□□ -1.26
PRKDC-211ENST00000546304 MYH9P35579 1960 aaKnown RBP7.19□□□□□ -1.26
PRKDC-211ENST00000546304 CEP290O15078 2479 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 SEPT4O43236 478 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 STX6O43752 255 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 EIF3JO75822 258 aaKnown RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 ZNF865P0CJ78 1059 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 AKR1A1P14550 325 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 SYT1P21579 422 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 U2AF2P26368 475 aaKnown RBP eCLIP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 CCND3P30281 292 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 ADCYAP1R1P41586 468 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 SETQ01105 290 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 MTMR1Q13613 665 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 ACVR2BQ13705 512 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 GNPTABQ3T906 1256 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 CEP55Q53EZ4 464 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 EARS2Q5JPH6 523 aaKnown RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 MCTP1Q6DN14 999 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 NEK8Q86SG6 692 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 SCFD2Q8WU76 684 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 LENG1Q96BZ8 264 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 GPRASP2Q96D09 838 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 UBE2OQ9C0C9 1292 aaKnown RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 PAK6Q9NQU5 681 aaPredicted RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 DNAJB12Q9NXW2 375 aaKnown RBP7.18□□□□□ -1.26
PRKDC-211ENST00000546304 ZFATQ9P243 1243 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 MTMR6Q9Y217 621 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 MRVI1Q9Y6F6 885 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 TCHHQ07283 1943 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 SCN10AQ9Y5Y9 1956 aa7.18□□□□□ -1.26
PRKDC-211ENST00000546304 IGLV3-22A0A075B6J6 115 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 FAM86B1E9PN63 330 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 ADCY6O43306 1168 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 FIBPO43427 364 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 MSCO60682 206 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 ARIH2O95376 493 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 TDP2O95551 362 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CYP3A4P08684 503 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 FAM86B2P0C5J1 330 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 RARBP10826 455 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CCL5P13501 91 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 GCFC2P16383 781 aaKnown RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 ITGB5P18084 799 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 UBA1P22314 1058 aaKnown RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CNGA1P29973 690 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CIITAP33076 1130 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 ZNF76P36508 570 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 TTLL4Q14679 1199 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 NAA30Q147X3 362 aaPredicted RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 LETM2Q2VYF4 491 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CCDC144BQ3MJ40 725 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 PRAMEF19Q5SWL8 479 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 TAPT1Q6NXT6 567 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 MOXD1Q6UVY6 613 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 SEPT14Q6ZU15 432 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 NIPA1Q7RTP0 329 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 BRAPQ7Z569 592 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 TLK2Q86UE8 772 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 NLRX1Q86UT6 975 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 LENG9Q96B70 501 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 CDHR1Q96JP9 859 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 PLVAPQ9BX97 442 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 PDGFCQ9NRA1 345 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 RTEL1Q9NZ71 1219 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 DDX20Q9UHI6 824 aaKnown RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 NOL7Q9UMY1 257 aaKnown RBP7.17□□□□□ -1.26
PRKDC-211ENST00000546304 UBIAD1Q9Y5Z9 338 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 KCNMB2Q9Y691 235 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 SYNRGQ9UMZ2 1314 aa7.17□□□□□ -1.26
PRKDC-211ENST00000546304 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
PRKDC-211ENST00000546304 ARID2Q68CP9 1835 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms