RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PFKFB3Q16875 520 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 RUFY3Q7L099 469 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 CCDC12Q8WUD4 166 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 SCLYQ96I15 445 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 GUCD1Q96NT3 240 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 C16orf70Q9BSU1 422 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 USP26Q9BXU7 913 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 RNF26Q9BY78 433 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 TM6SF1Q9BZW5 370 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 HDAC6Q9UBN7 1215 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ZNF215Q9UL58 517 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 NAP1L2Q9ULW6 460 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-223ENST00000545440 PCDHA6Q9UN73 950 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 PCDHA8Q9Y5H6 950 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 UBIAD1Q9Y5Z9 338 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 USP3Q9Y6I4 520 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ARID2Q68CP9 1835 aa8.77□□□□□ -1.01
SNHG1-223ENST00000545440 ATG2AQ2TAZ0 1938 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 KIAA1671Q9BY89 1806 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 MAFGO15525 162 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 SORBS3O60504 671 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 FGBP02675 491 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 IQCF3P0C7M6 154 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 SCG2P13521 617 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 KCNA2P16389 499 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 SREBF1P36956 1147 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 CHMP4BP1P59074 171 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 MTMR1Q13613 665 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 COX20Q5RI15 118 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 LRRC8DQ7L1W4 858 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 CYFIP1Q7L576 1253 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 VWCEQ96DN2 955 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 GPR20Q99678 358 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 ALG1Q9BT22 464 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 ANO3Q9BYT9 981 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 TTYH1Q9H313 450 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-223ENST00000545440 RTEL1Q9NZ71 1219 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 CYP46A1Q9Y6A2 500 aa8.76□□□□□ -1.01
SNHG1-223ENST00000545440 SMCO2A6NFE2 343 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 PRPF3O43395 683 aaKnown RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 EIF5BO60841 1220 aaKnown RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 BAIAP3O94812 1187 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 ACTN1P12814 892 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 SELPP16109 830 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 MAPK1P28482 360 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 TOB2Q14106 344 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 RAB30Q15771 203 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 NTRK3Q16288 839 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 MCTP2Q6DN12 878 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 OTOP2Q7RTS6 562 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 SERINC5Q86VE9 423 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 REXO1Q8N1G1 1221 aaKnown RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 CCDC148Q8NFR7 591 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 ZDHHC1Q8WTX9 485 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 DHX38Q92620 1227 aaKnown RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 TIFAQ96CG3 184 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 IFT43Q96FT9 208 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 PBX4Q9BYU1 374 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 ZMYND12Q9H0C1 365 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 JPH1Q9HDC5 661 aaPredicted RBP8.75□□□□□ -1.01
SNHG1-223ENST00000545440 ATP13A2Q9NQ11 1180 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 JADE2Q9NQC1 790 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 NFASCO94856 1347 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 EMSYQ7Z589 1322 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 COL4A6Q14031 1691 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 TTC3P53804 2025 aa8.75□□□□□ -1.01
SNHG1-223ENST00000545440 C17orf102A2RUQ5 167 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 ATP9AO75110 1047 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 CAND2O75155 1236 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 RPLP1P05386 114 aaKnown RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 SMIM10L2AP0DMW4 78 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 SMIM10L2BP0DMW5 78 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 CKBP12277 381 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 IFNAR1P17181 557 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 GNA11P29992 359 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 PDIA3P30101 505 aaKnown RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 TCF7P36402 384 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 ANAPC15P60006 121 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 AKAP17AQ02040 695 aaKnown RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 PKN1Q16512 942 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 TRIM71Q2Q1W2 868 aaKnown RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 CEP55Q53EZ4 464 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 CAPN12Q6ZSI9 719 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 NIPA1Q7RTP0 329 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 DEFB128Q7Z7B8 93 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 CRYGNQ8WXF5 182 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 ZNF274Q96GC6 653 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-223ENST00000545440 FAM161BQ96MY7 647 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 SLC9A7Q96T83 725 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 MXRA8Q9BRK3 442 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 SEMA6BQ9H3T3 888 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 BCAS3Q9H6U6 928 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 C6orf50Q9HD87 102 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 KCNH7Q9NS40 1196 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 DCTN4Q9UJW0 460 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 SLC4A7Q9Y6M7 1214 aa8.74□□□□□ -1.01
SNHG1-223ENST00000545440 EYSQ5T1H1 3165 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms