RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 GPR20Q99678 358 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 MKS1Q9NXB0 559 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNHG1-222ENST00000545308 DSEQ9UL01 958 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 PALD1Q9ULE6 856 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 DUSP10Q9Y6W6 482 aa5.3□□□□□ -1.56
SNHG1-222ENST00000545308 MROH2BQ7Z745 1585 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 PRDM2Q13029 1718 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CNR2P34972 360 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 MAGEA10P43363 369 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 PUM1Q14671 1186 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 ZNF827Q17R98 1081 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 MINDY4Q4G0A6 757 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 FIGNQ5HY92 759 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 PPP4R4Q6NUP7 873 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CABP7Q86V35 215 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 RIOX2Q8IUF8 465 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 RBM12BQ8IXT5 1001 aaKnown RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 SMC5Q8IY18 1101 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 UHMK1Q8TAS1 419 aaKnown RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 TGFBRAP1Q8WUH2 860 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CPA5Q8WXQ8 436 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CLIP3Q96DZ5 547 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 HSPBAP1Q96EW2 488 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 ORAI2Q96SN7 254 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 PCGF6Q9BYE7 350 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 PCIF1Q9H4Z3 704 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 BCAS3Q9H6U6 928 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 RXFP1Q9HBX9 757 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 SLC6A20Q9NP91 592 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 COA3Q9Y2R0 106 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-222ENST00000545308 TELO2Q9Y4R8 837 aa5.29□□□□□ -1.56
SNHG1-222ENST00000545308 XPOTO43592 962 aaKnown RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 KDM1AO60341 852 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 DGKIO75912 1065 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 CYP2C19P33261 490 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 GJA9P57773 515 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 SLC9A5Q14940 896 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 MROH9Q5TGP6 573 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 CC2D1AQ6P1N0 951 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 LZTR1Q8N653 840 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 NETO2Q8NC67 525 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 SMARCC2Q8TAQ2 1214 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 ZNF496Q96IT1 587 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 C16orf92Q96LL3 132 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 TEKT5Q96M29 485 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 LRGUKQ96M69 825 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 NOX5Q96PH1 765 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 MPHOSPH6Q99547 160 aaKnown RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 SEMA4AQ9H3S1 761 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 ACSS2Q9NR19 701 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 SPATA6Q9NWH7 488 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 DDX20Q9UHI6 824 aaKnown RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 NUDT5Q9UKK9 219 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 ZNF652Q9Y2D9 606 aa5.28□□□□□ -1.56
SNHG1-222ENST00000545308 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
SNHG1-222ENST00000545308 ARAP1Q96P48 1450 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 KLHL33A6NCF5 533 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 CHD1O14646 1710 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 HIP1RO75146 1068 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 ZBTB7AO95365 584 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 CYP17A1P05093 508 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 ITGB3P05106 788 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 U2AF1L5P0DN76 240 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 SARSP49591 514 aaKnown RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 U2AF1Q01081 240 aaKnown RBP eCLIP5.27□□□□□ -1.577e-8■■□□□ 12.7
SNHG1-222ENST00000545308 CACNB2Q08289 660 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 HDAC1Q13547 482 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 MOGSQ13724 837 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 GTF2H3Q13889 308 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 GALEQ14376 348 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 GRM3Q14832 879 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 TMEM132BQ14DG7 1078 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 CATSPEREQ5SY80 951 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 EFCAB2Q5VUJ9 269 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 FRMD7Q6ZUT3 714 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 ZNF761Q86XN6 746 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 RTF1Q92541 710 aaKnown RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 JADE3Q92613 823 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 AIFM3Q96NN9 605 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 RBM15Q96T37 977 aaKnown RBP eCLIP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 NUP88Q99567 741 aaPredicted RBP5.27□□□□□ -1.57
SNHG1-222ENST00000545308 ZNF700Q9H0M5 742 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 KCNH7Q9NS40 1196 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 NTMQ9P121 344 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 MRFAP1Q9Y605 127 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 ATP23Q9Y6H3 246 aa5.27□□□□□ -1.57
SNHG1-222ENST00000545308 RASSF10A6NK89 507 aa5.26□□□□□ -1.57
SNHG1-222ENST00000545308 SLC27A2O14975 620 aa5.26□□□□□ -1.57
SNHG1-222ENST00000545308 TADA3O75528 432 aa5.26□□□□□ -1.57
SNHG1-222ENST00000545308 EIF3JO75822 258 aaKnown RBP5.26□□□□□ -1.57
SNHG1-222ENST00000545308 IL33O95760 270 aa5.26□□□□□ -1.57
SNHG1-222ENST00000545308 C4BPAP04003 597 aaKnown RBP5.26□□□□□ -1.57
SNHG1-222ENST00000545308 NTRK1P04629 796 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms