RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 ZNF618Q5T7W0 954 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 ZNF697Q5TEC3 545 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 RASIP1Q5U651 963 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 LRCH2Q5VUJ6 765 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 FAM109BQ6ICB4 259 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-224ENST00000544990 SWSAP1Q6NVH7 229 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 TAF2Q6P1X5 1199 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 ABHD15Q6UXT9 468 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 NEK8Q86SG6 692 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 DEFB123Q8N688 67 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 FAM184AQ8NB25 1140 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 LENG9Q96B70 501 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 UIMC1Q96RL1 719 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 PCYT2Q99447 389 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 RIT2Q99578 217 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 DDX25Q9UHL0 483 aaKnown RBP8.32□□□□□ -1.08
CPSF7-224ENST00000544990 TUBE1Q9UJT0 475 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 PCDHA10Q9Y5I2 948 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 SLC4A7Q9Y6M7 1214 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 WDR81Q562E7 1941 aa8.32□□□□□ -1.08
CPSF7-224ENST00000544990 TMEM265A0A087WTH1 108 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 WDR64B1ANS9 1081 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 EDIL3O43854 480 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 MARCH6O60337 910 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CCNT1O60563 726 aaKnown RBP8.31□□□□□ -1.08
CPSF7-224ENST00000544990 JAK2O60674 1132 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 DTNBO60941 627 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 EFCAB14O75071 495 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 BAIAP3O94812 1187 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 BAG4O95429 457 aaKnown RBP8.31□□□□□ -1.08
CPSF7-224ENST00000544990 TDP2O95551 362 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CCNE2O96020 404 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CXCL10P02778 98 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 MMP1P03956 469 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 KCNJ6P48051 423 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 MCM2P49736 904 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 JAK3P52333 1124 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 IGBP1P78318 339 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 IKBKEQ14164 716 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 PLCB4Q15147 1175 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 RAB30Q15771 203 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 TRIM71Q2Q1W2 868 aaKnown RBP8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-224ENST00000544990 KRT40Q6A162 431 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 PPP4R3AQ6IN85 833 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CNKSR3Q6P9H4 555 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 PIK3AP1Q6ZUJ8 805 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CKAP2LQ8IYA6 745 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 TET1Q8NFU7 2136 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 RDM1Q8NG50 284 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 PHOSPHO2Q8TCD6 241 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 SLC5A5Q92911 643 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 C8orf76Q96K31 380 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 FAM20AQ96MK3 541 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 MBOAT7Q96N66 472 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 DISC1Q9NRI5 854 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 GJB4Q9NTQ9 266 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-224ENST00000544990 MSRAQ9UJ68 235 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 KIF3AQ9Y496 699 aa8.31□□□□□ -1.08
CPSF7-224ENST00000544990 ABHD14A-ACY1A0A1B0GW23 586 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 MBLAC1A4D2B0 266 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-224ENST00000544990 KIF28PB7ZC32 967 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 M0QZ92 97 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 TBX3O15119 743 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 NBNO60934 754 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 PSMD10O75832 226 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 ATP2A2P16615 1042 aaKnown RBP8.3□□□□□ -1.08
CPSF7-224ENST00000544990 KCNA1Q09470 495 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 ST3GAL1Q11201 340 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 NR5A1Q13285 461 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 ZNF484Q5JVG2 852 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 FAM26DQ5JW98 314 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 IER5Q5VY09 327 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 MIER3Q7Z3K6 550 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 RPAINQ86UA6 219 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 CCDC60Q8IWA6 550 aaPredicted RBP8.3□□□□□ -1.08
CPSF7-224ENST00000544990 DIS3L2Q8IYB7 885 aaKnown RBP8.3□□□□□ -1.08
CPSF7-224ENST00000544990 ATP8B4Q8TF62 1192 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 WNT8BQ93098 351 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 FAM167AQ96KS9 214 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 TBC1D32Q96NH3 1257 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 SLC9A7Q96T83 725 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 NRBP2Q9NSY0 501 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 GABBR1Q9UBS5 961 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 CEP131Q9UPN4 1083 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 PCDHA2Q9Y5H9 948 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 COL1A2P08123 1366 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 EVPLQ92817 2033 aa8.3□□□□□ -1.08
CPSF7-224ENST00000544990 SMIM35A0A1B0GVV1 85 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 GRXCR1A8MXD5 290 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 BTBD18B2RXH4 712 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 WNT7AO00755 349 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 CHMP2AO43633 222 aa8.29□□□□□ -1.08
CPSF7-224ENST00000544990 DKC1O60832 514 aaKnown RBP eCLIP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms