RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 TFAP4Q01664 338 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 LMNB2Q03252 620 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 PPARAQ07869 468 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 GRIK4Q16099 956 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 ARMCX2Q7L311 632 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 MYLIPQ8WY64 445 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
RFC5-209ENST00000543153 ABHD16BQ9H3Z7 469 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 ACAD9Q9H845 621 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
RFC5-209ENST00000543153 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 DNAJC25-GNG10A0A024R161 153 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 MYADML2A6NDP7 307 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 KIAA0355O15063 1070 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 TLR3O15455 904 aaKnown RBP11.9□□□□□ -0.5
RFC5-209ENST00000543153 ASGR1P07306 291 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 ALAS1P13196 640 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 ITGB8P26012 769 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 EIF4A3P38919 411 aaKnown RBP11.9□□□□□ -0.5
RFC5-209ENST00000543153 OAZ1P54368 228 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 CCDC96Q2M329 555 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 MAMDC4Q6UXC1 1216 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 ACAD11Q709F0 780 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 GRIN3AQ8TCU5 1115 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 SEMA6BQ9H3T3 888 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 PCDHGB7Q9Y5F8 929 aa11.9□□□□□ -0.5
RFC5-209ENST00000543153 IGKV6D-41A0A0C4DH26 115 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
RFC5-209ENST00000543153 C9orf172C9J069 976 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 PF4P02776 101 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
RFC5-209ENST00000543153 MX1P20591 662 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 MCCP23508 829 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 NRG1Q02297 640 aaPredicted RBP11.89□□□□□ -0.51
RFC5-209ENST00000543153 CAMK2GQ13555 558 aaPredicted RBP11.89□□□□□ -0.51
RFC5-209ENST00000543153 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
RFC5-209ENST00000543153 SNAP47Q5SQN1 464 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 CCDC129Q6ZRS4 1044 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 UBASH3BQ8TF42 649 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 MKL1Q969V6 931 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 TOX2Q96NM4 488 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 RAD18Q9NS91 495 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 PLIN4Q96Q06 1357 aa11.89□□□□□ -0.51
RFC5-209ENST00000543153 ELP1O95163 1332 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 DNAH12Q6ZR08 3092 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 RANBP6O60518 1105 aaKnown RBP11.88□□□□□ -0.51
RFC5-209ENST00000543153 TIMP1P01033 207 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 EPHB4P54760 987 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 CNTN2Q02246 1040 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 TNFAIP2Q03169 654 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 PPIGQ13427 754 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFC5-209ENST00000543153 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 TMEM199Q8N511 208 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 KLHDC9Q8NEP7 349 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 RHOVQ96L33 236 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 AP5M1Q9H0R1 490 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 TTYH1Q9H313 450 aaPredicted RBP11.88□□□□□ -0.51
RFC5-209ENST00000543153 CCDC86Q9H6F5 360 aaKnown RBP11.88□□□□□ -0.51
RFC5-209ENST00000543153 PLXNA1Q9UIW2 1896 aa11.88□□□□□ -0.51
RFC5-209ENST00000543153 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
RFC5-209ENST00000543153 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 ASB14A6NK59 587 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 ECEL1O95672 775 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 COL8A1P27658 744 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 SNAP25P60880 206 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 RACK1P63244 317 aaKnown RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 BEX3Q00994 111 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 RRP12Q5JTH9 1297 aaKnown RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 ZMYM1Q5SVZ6 1142 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 TLK2Q86UE8 772 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 TMEM130Q8N3G9 435 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 PI4K2BQ8TCG2 481 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 OTUD7AQ8TE49 926 aaPredicted RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 STAG1Q8WVM7 1258 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 SPON2Q9BUD6 331 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
RFC5-209ENST00000543153 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
RFC5-209ENST00000543153 ARVCFO00192 962 aa11.86□□□□□ -0.51
RFC5-209ENST00000543153 ADCY6O43306 1168 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms