RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ARFGAP3Q9NP61 516 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 EDARQ9UNE0 448 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 SRPK3Q9UPE1 567 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 RPS6KL1Q9Y6S9 549 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 U3KQE9 123 aa4.79□□□□□ -1.64
SFSWAP-211ENST00000542813 GNAT3A8MTJ3 354 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 FKTNO75072 461 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 CLASP2O75122 1294 aaKnown RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 CLEC2LP0C7M8 214 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SRGNP10124 158 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 FPR2P25090 351 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 PEX2P28328 305 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC5A3P53794 718 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC16A1P53985 500 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 CACNB3P54284 484 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 MANFP55145 182 aaKnown RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 MOGSQ13724 837 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 TMEM132BQ14DG7 1078 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 TUBB8Q3ZCM7 444 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC23A3Q6PIS1 610 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 NPNTQ6UXI9 565 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 TSPYL5Q86VY4 417 aaPredicted RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC41A1Q8IVJ1 513 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 KRT78Q8N1N4 520 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 Q8N1Y9 231 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 TMTC2Q8N394 836 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 PRR18Q8N4B5 295 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 OR2C3Q8N628 320 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 USHBP1Q8N6Y0 703 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 PPM1NQ8N819 430 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SH3RF2Q8TEC5 729 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 CCT6BQ92526 530 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 DPF3Q92784 378 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 DLG3Q92796 817 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 COA7Q96BR5 231 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 EAF2Q96CJ1 260 aaPredicted RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 RIPOR3Q96MK2 946 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC38A3Q99624 504 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 PAGR1Q9BTK6 254 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 ANO3Q9BYT9 981 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 WDR12Q9GZL7 423 aaKnown RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 DUSP15Q9H1R2 295 aaPredicted RBP4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 EPB41L1Q9H4G0 881 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 KCNH7Q9NS40 1196 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 L1RE1Q9UN81 338 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 LRCH1Q9Y2L9 728 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF281Q9Y2X9 895 aa4.78□□□□□ -1.64
SFSWAP-211ENST00000542813 hCG_1642624A0A1W2PR95 340 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 CAPN8A6NHC0 703 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM155AB1AL88 458 aaPredicted RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 PRRT4C9JH25 899 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 IGF2BP3O00425 579 aaKnown RBP eCLIP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 HTR1BP28222 390 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 CHKAP35790 457 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 FNTBP49356 437 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 MRPS9P82933 396 aaKnown RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 SIM2Q14190 667 aaPredicted RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 EPHA7Q15375 998 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 CNN3Q15417 329 aaKnown RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 FBLN7Q53RD9 439 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 CCDC62Q6P9F0 684 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 RNF111Q6ZNA4 994 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 KRBA2Q6ZNG9 492 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 ESPNLQ6ZVH7 1005 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 SAPCD2Q86UD0 394 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 NLGN4XQ8N0W4 816 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 SPATA5Q8NB90 893 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 FLAD1Q8NFF5 587 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 PIP4K2CQ8TBX8 421 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 AUTS2Q8WXX7 1259 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 RAX2Q96IS3 184 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 HEXIM2Q96MH2 286 aaKnown RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 CD244Q9BZW8 370 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 NUP62CLQ9H1M0 184 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 VPS11Q9H270 941 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 SAGE1Q9NXZ1 904 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 MARCH2Q9P0N8 246 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 DSEQ9UL01 958 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 PLAGL2Q9UPG8 496 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 COA3Q9Y2R0 106 aaPredicted RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 PCDHGB3Q9Y5G1 929 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 SNX11Q9Y5W9 270 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 ATP23Q9Y6H3 246 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 RSF1Q96T23 1441 aaPredicted RBP4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 PEG3Q9GZU2 1588 aa4.77□□□□□ -1.65
SFSWAP-211ENST00000542813 MGEA5O60502 916 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 DGKIO75912 1065 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 ALDH2P05091 517 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 LPLP06858 475 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 FAM163BP0C2L3 166 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 GRK6P43250 576 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 PRIM2P49643 509 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 CEBPAP49715 358 aaPredicted RBP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 GEMIN4P57678 1058 aaKnown RBP4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 TNFAIP2Q03169 654 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 SEC23AQ15436 765 aa4.76□□□□□ -1.65
SFSWAP-211ENST00000542813 MUM1Q2TAK8 710 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms