RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 TMC7Q7Z402 723 aa17.46■□□□□ 0.39
RTN3-211ENST00000542238 CASD1Q96PB1 797 aa17.46■□□□□ 0.39
RTN3-211ENST00000542238 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
RTN3-211ENST00000542238 S1PR5Q9H228 398 aa17.46■□□□□ 0.39
RTN3-211ENST00000542238 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
RTN3-211ENST00000542238 WDR64B1ANS9 1081 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
RTN3-211ENST00000542238 ADD1P35611 737 aaKnown RBP17.45■□□□□ 0.38
RTN3-211ENST00000542238 KCNC3Q14003 757 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 ADCK5Q3MIX3 580 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 LRRC55Q6ZSA7 311 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 SCLT1Q96NL6 688 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 APOL5Q9BWW9 433 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 SPG21Q9NZD8 308 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 NR2E1Q9Y466 385 aa17.45■□□□□ 0.38
RTN3-211ENST00000542238 HIDE1A8MVS5 230 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
RTN3-211ENST00000542238 AKAP17AQ02040 695 aaKnown RBP17.44■□□□□ 0.38
RTN3-211ENST00000542238 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
RTN3-211ENST00000542238 TPRNQ4KMQ1 711 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 CES5AQ6NT32 575 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 SYCE2Q6PIF2 218 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 ECHDC2Q86YB7 292 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 CASP10Q92851 521 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 PHOX2BQ99453 314 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 IRF2BPLQ9H1B7 796 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 ADAMTS10Q9H324 1103 aa17.44■□□□□ 0.38
RTN3-211ENST00000542238 OATP04181 439 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 CIITAP33076 1130 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 PBX3P40426 434 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 SMC1AQ14683 1233 aaKnown RBP17.43■□□□□ 0.38
RTN3-211ENST00000542238 LRRC71Q8N4P6 559 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 ASIC4Q96FT7 647 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 DISC1Q9NRI5 854 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 RNF19AQ9NV58 838 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
RTN3-211ENST00000542238 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
RTN3-211ENST00000542238 EOMESO95936 686 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 SP100P23497 879 aaPredicted RBP17.42■□□□□ 0.38
RTN3-211ENST00000542238 CA8P35219 290 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 TBC1D8BQ0IIM8 1120 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 TCF15Q12870 199 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 LINC01465Q8N7H1 131 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 NLRP7Q8WX94 980 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 NECTIN4Q96NY8 510 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 MRPL9Q9BYD2 267 aaKnown RBP17.42■□□□□ 0.38
RTN3-211ENST00000542238 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 MYO10Q9HD67 2058 aa17.42■□□□□ 0.38
RTN3-211ENST00000542238 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 GAS7O60861 476 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
RTN3-211ENST00000542238 AVPR2P30518 371 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 SFNP31947 248 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 ALDH7A1P49419 539 aaKnown RBP17.41■□□□□ 0.38
RTN3-211ENST00000542238 GPC3P51654 580 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 CDC42EP1Q00587 391 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 PRKCEQ02156 737 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 ITIH3Q06033 890 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 CLLU1OSQ5K130 101 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 SLC39A11Q8N1S5 342 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 MRPL43Q8N983 215 aaKnown RBP17.41■□□□□ 0.38
RTN3-211ENST00000542238 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 HELQQ8TDG4 1101 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 ZNF668Q96K58 619 aaPredicted RBP17.41■□□□□ 0.38
RTN3-211ENST00000542238 HCFC2Q9Y5Z7 792 aa17.41■□□□□ 0.38
RTN3-211ENST00000542238 C2orf71A6NGG8 1288 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 ST18O60284 1047 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 ZNF862O60290 1169 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 JAK3P52333 1124 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 VCPP55072 806 aaKnown RBP17.4■□□□□ 0.38
RTN3-211ENST00000542238 Q6ZUG5 572 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 BRF1Q92994 677 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 TMEM169Q96HH4 297 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 RIT2Q99578 217 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 ADAM7Q9H2U9 754 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 CACNA1HO95180 2353 aa17.4■□□□□ 0.38
RTN3-211ENST00000542238 CARNS1A5YM72 827 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 MSH4O15457 936 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 CHMP2AO43633 222 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 MTHFRP42898 656 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 DNM2P50570 870 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 USP11P51784 963 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 NUBP1P53384 320 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 MTMR3Q13615 1198 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 ZNF598Q86UK7 904 aaKnown RBP17.39■□□□□ 0.37
RTN3-211ENST00000542238 UBALD2Q8IYN6 164 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 KREMEN2Q8NCW0 462 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 RSPH1Q8WYR4 309 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 ATOH1Q92858 354 aaPredicted RBP17.39■□□□□ 0.37
RTN3-211ENST00000542238 PHKBQ93100 1093 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 LENG9Q96B70 501 aa17.39■□□□□ 0.37
RTN3-211ENST00000542238 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms