RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 CRY1Q16526 586 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 PAQR3Q6TCH7 311 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 PTRH1Q86Y79 214 aaKnown RBP10.66□□□□□ -0.7
MRPS35-204ENST00000542199 DCP2Q8IU60 420 aaKnown RBP10.66□□□□□ -0.7
MRPS35-204ENST00000542199 RBM12BQ8IXT5 1001 aaKnown RBP10.66□□□□□ -0.7
MRPS35-204ENST00000542199 AHI1Q8N157 1196 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 NXPE1Q8N323 547 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 CD244Q9BZW8 370 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 SLC6A17Q9H1V8 727 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 SLC6A20Q9NP91 592 aa10.66□□□□□ -0.7
MRPS35-204ENST00000542199 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-204ENST00000542199 GSTA4O15217 222 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 NPTXRO95502 500 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 HSP90AB1P08238 724 aaKnown RBP10.65□□□□□ -0.7
MRPS35-204ENST00000542199 SLC6A11P48066 632 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 ITPK1Q13572 414 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-204ENST00000542199 EMC4Q5J8M3 183 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-204ENST00000542199 ARHGAP36Q6ZRI8 547 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 CHST14Q8NCH0 376 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 BCAS3Q9H6U6 928 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 PALD1Q9ULE6 856 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 C5P01031 1676 aa10.65□□□□□ -0.7
MRPS35-204ENST00000542199 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-204ENST00000542199 ITGB4P16144 1822 aa10.65□□□□□ -0.71
MRPS35-204ENST00000542199 BIN1O00499 593 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 SLC27A2O14975 620 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 MPOP05164 745 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 LACTBP83111 547 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-204ENST00000542199 GPR19Q15760 415 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 PLEKHN1Q494U1 663 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-204ENST00000542199 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-204ENST00000542199 AFAP1L2Q8N4X5 818 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 UHMK1Q8TAS1 419 aaKnown RBP10.64□□□□□ -0.71
MRPS35-204ENST00000542199 FAM168AQ92567 244 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 LIN37Q96GY3 246 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-204ENST00000542199 DSEQ9UL01 958 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 PLA2G2DQ9UNK4 145 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 TELO2Q9Y4R8 837 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
MRPS35-204ENST00000542199 ZNF503-AS2A6NEH8 195 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 MAN2B1O00754 1011 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 HGSO14964 777 aaPredicted RBP10.63□□□□□ -0.71
MRPS35-204ENST00000542199 TADA3O75528 432 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 LTFP02788 710 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 STRN3Q13033 797 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 C2orf69Q8N8R5 385 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 SEC14L1Q92503 715 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 ORAI3Q9BRQ5 295 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 AP5M1Q9H0R1 490 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 MYOTQ9UBF9 498 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
MRPS35-204ENST00000542199 OR14I1A6ND48 311 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 KRIT1O00522 736 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 MTHFSP49914 203 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 PRR5P85299 388 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 SMIM5Q71RC9 77 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 PEX11GQ96HA9 241 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 CABP5Q9NP86 173 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 B4GALT6Q9UBX8 382 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
MRPS35-204ENST00000542199 SRPK3Q9UPE1 567 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 PCDHB4Q9Y5E5 795 aa10.62□□□□□ -0.71
MRPS35-204ENST00000542199 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 KRT37O76014 449 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 IRAK1P51617 712 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 NFKB2Q00653 900 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 DSG1Q02413 1049 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 GPR162Q16538 588 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
MRPS35-204ENST00000542199 MILR1Q7Z6M3 343 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 NUDT5Q9UKK9 219 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
MRPS35-204ENST00000542199 UBR3Q6ZT12 1888 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 F2P00734 622 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 YBX3P16989 372 aaKnown RBP eCLIP10.6□□□□□ -0.711e-6■□□□□ 10.1
MRPS35-204ENST00000542199 NR1I3Q14994 352 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
MRPS35-204ENST00000542199 CPZQ66K79 652 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 IRF2BP1Q8IU81 584 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 NOSTRINQ8IVI9 506 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.6□□□□□ -0.71
MRPS35-204ENST00000542199 KCNK12Q9HB15 430 aa10.6□□□□□ -0.71
MRPS35-204ENST00000542199 hCG_2014768A0A024R1R8 64 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 TCRBV5S2A0A599 114 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 MAPKAPK2P49137 400 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 TUSC3Q13454 348 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 MPZL3Q6UWV2 235 aa10.59□□□□□ -0.71
MRPS35-204ENST00000542199 HHIPL2Q6UWX4 724 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms