RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 VSIG10LQ86VR7 867 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 HNRNPLLQ8WVV9 542 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ACCSQ96QU6 501 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 RHOXF2Q9BQY4 288 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ANKEF1Q9NU02 776 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SBF1O95248 1867 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 PTPRFP10586 1907 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 MYH9P35579 1960 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 A0A087X0T9 212 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ATP2A1O14983 1001 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 EXOC3O60645 756 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 NR3C2P08235 984 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 FAM228BP0C875 321 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ANXA13P27216 316 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 PRKCIP41743 596 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 NAP1L1P55209 391 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 JAM2P57087 298 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 PLS1Q14651 629 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ZNF746Q6NUN9 644 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 CATSPERGQ6ZRH7 1159 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SMAP1Q8IYB5 467 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 GPC2Q8N158 579 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SLC17A8Q8NDX2 589 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 NSUN6Q8TEA1 469 aaKnown RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 PNKPQ96T60 521 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ADAMTS1Q9UHI8 967 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 SALL4Q9UJQ4 1053 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 TSKSQ9UJT2 592 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 ZNF214Q9UL59 606 aaPredicted RBP11.83□□□□□ -0.52
NECAP1-206ENST00000542095 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 HYOU1Q9Y4L1 999 aa11.83□□□□□ -0.52
NECAP1-206ENST00000542095 CCNE2O96020 404 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 PTK2Q05397 1052 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 NAB2Q15742 525 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 UGCGQ16739 394 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 NLGN2Q8NFZ4 835 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 TMEM174Q8WUU8 243 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 IWS1Q96ST2 819 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 SENP7Q9BQF6 1050 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 MOV10L1Q9BXT6 1211 aaKnown RBP11.82□□□□□ -0.52
NECAP1-206ENST00000542095 TEX13BQ9BXU2 312 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 MAF1Q9H063 256 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 ACAD9Q9H845 621 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 LCTP09848 1927 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 SSC5DA1L4H1 1573 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 BACH1O14867 736 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 ZNF185O15231 689 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 BUB1O43683 1085 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 DKC1O60832 514 aaKnown RBP eCLIP11.82□□□□□ -0.52
NECAP1-206ENST00000542095 TBC1D8O95759 1140 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 KRT13P13646 458 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 MCM3P25205 808 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 SNRPFP62306 86 aaKnown RBP11.82□□□□□ -0.52
NECAP1-206ENST00000542095 BFSP1Q12934 665 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 TMEM132BQ14DG7 1078 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 LONRF2Q1L5Z9 754 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 ZNF571Q7Z3V5 609 aaPredicted RBP11.82□□□□□ -0.52
NECAP1-206ENST00000542095 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
NECAP1-206ENST00000542095 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 PCDHA10Q9Y5I2 948 aa11.82□□□□□ -0.52
NECAP1-206ENST00000542095 MYPNQ86TC9 1320 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 FERP16591 822 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 STAT1P42224 750 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 GTF2BQ00403 316 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 MYL7Q01449 175 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 KIAA0753Q2KHM9 967 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 UTP14CQ5TAP6 766 aaKnown RBP11.81□□□□□ -0.52
NECAP1-206ENST00000542095 FMNL3Q8IVF7 1028 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 CDHR1Q96JP9 859 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 INPP4AQ96PE3 977 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-206ENST00000542095 OSBPL9Q96SU4 736 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 ATP8B3O60423 1300 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 BTNL10A8MVZ5 291 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 STAM2O75886 525 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 KLRC1P26715 233 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 NCKAP1LP55160 1127 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 WDR93Q6P2C0 686 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 INTS8Q75QN2 995 aaKnown RBP11.81□□□□□ -0.52
NECAP1-206ENST00000542095 OTUD6AQ7L8S5 288 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 HAUS6Q7Z4H7 955 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 CYP39A1Q9NYL5 469 aa11.81□□□□□ -0.52
NECAP1-206ENST00000542095 AJAP1Q9UKB5 411 aaPredicted RBP11.81□□□□□ -0.52
NECAP1-206ENST00000542095 TARSL2A2RTX5 802 aaKnown RBP11.8□□□□□ -0.52
NECAP1-206ENST00000542095 TMEM150BA6NC51 233 aa11.8□□□□□ -0.52
NECAP1-206ENST00000542095 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
NECAP1-206ENST00000542095 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
NECAP1-206ENST00000542095 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms