RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 FOXQ1Q9C009 403 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
PUDP-206ENST00000540122 SMG5Q9UPR3 1016 aaKnown RBP17.71■□□□□ 0.43
PUDP-206ENST00000540122 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 MEIS2O14770 477 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 LRRN2O75325 713 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 TGM1P22735 817 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 GBP2P32456 591 aaPredicted RBP17.7■□□□□ 0.42
PUDP-206ENST00000540122 STAT5BP51692 787 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 CRYBB1P53674 252 aaPredicted RBP17.7■□□□□ 0.42
PUDP-206ENST00000540122 POLGP54098 1239 aaPredicted RBP17.7■□□□□ 0.42
PUDP-206ENST00000540122 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
PUDP-206ENST00000540122 GRM4Q14833 912 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 SEC23AQ15436 765 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 PPM1JQ5JR12 505 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 C20orf194Q5TEA3 1177 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 ECHDC2Q86YB7 292 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 RNF169Q8NCN4 708 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 EPS15L1Q9UBC2 864 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 SLC9A2Q9UBY0 812 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 FBXO4Q9UKT5 387 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 PCDHGA2Q9Y5H1 932 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
PUDP-206ENST00000540122 DCLRE1AQ6PJP8 1040 aa17.69■□□□□ 0.42
PUDP-206ENST00000540122 HELQQ8TDG4 1101 aa17.69■□□□□ 0.42
PUDP-206ENST00000540122 ATRIPQ8WXE1 791 aa17.69■□□□□ 0.42
PUDP-206ENST00000540122 EPC1Q9H2F5 836 aa17.69■□□□□ 0.42
PUDP-206ENST00000540122 CACNA1IQ9P0X4 2223 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 C2orf16Q68DN1 1984 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 CLCN4P51793 760 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 ACTR2P61160 394 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 COL9A3Q14050 684 aaPredicted RBP17.68■□□□□ 0.42
PUDP-206ENST00000540122 ACAP1Q15027 740 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 DDX53Q86TM3 631 aaKnown RBP17.68■□□□□ 0.42
PUDP-206ENST00000540122 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 BCL7CQ8WUZ0 217 aaPredicted RBP17.68■□□□□ 0.42
PUDP-206ENST00000540122 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 NXPE3Q969Y0 559 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 MRPL9Q9BYD2 267 aaKnown RBP17.68■□□□□ 0.42
PUDP-206ENST00000540122 KRT23Q9C075 422 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 PARD6AQ9NPB6 346 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 JADE2Q9NQC1 790 aa17.68■□□□□ 0.42
PUDP-206ENST00000540122 SPATA6Q9NWH7 488 aaPredicted RBP17.68■□□□□ 0.42
PUDP-206ENST00000540122 LAMTOR5O43504 91 aa17.67■□□□□ 0.42
PUDP-206ENST00000540122 GPR32O75388 356 aa17.67■□□□□ 0.42
PUDP-206ENST00000540122 WTAPQ15007 396 aa17.67■□□□□ 0.42
PUDP-206ENST00000540122 STAMQ92783 540 aa17.67■□□□□ 0.42
PUDP-206ENST00000540122 MYADMQ96S97 322 aa17.67■□□□□ 0.42
PUDP-206ENST00000540122 WDR6Q9NNW5 1121 aaKnown RBP17.67■□□□□ 0.42
PUDP-206ENST00000540122 FAM208BQ5VWN6 2430 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 MAFGO15525 162 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 ZC3H11AO75152 810 aaKnown RBP eCLIP17.66■□□□□ 0.42
PUDP-206ENST00000540122 VTNP04004 478 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 HOXB3P14651 431 aaPredicted RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 SLC26A2P50443 739 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 MFAP1P55081 439 aaKnown RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 STARD6P59095 220 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 CSTF1Q05048 431 aaKnown RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 DMWDQ09019 674 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 ZNF598Q86UK7 904 aaKnown RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 ZBTB44Q8NCP5 570 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 CMASQ8NFW8 434 aaPredicted RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 IGSF21Q96ID5 467 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 KLHL5Q96PQ7 755 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 VN1R3Q9BXE9 311 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 SLC2A4RGQ9NR83 387 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 CLUHO75153 1309 aa17.66■□□□□ 0.42
PUDP-206ENST00000540122 BAZ2BQ9UIF8 2168 aaKnown RBP17.66■□□□□ 0.42
PUDP-206ENST00000540122 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 HBP1O60381 514 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 LILRB5O75023 590 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 KLRC2P26717 231 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 EMILIN2Q9BXX0 1053 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 BCO2Q9BYV7 579 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 CNNM2Q9H8M5 875 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 SH2B1Q9NRF2 756 aaPredicted RBP17.65■□□□□ 0.42
PUDP-206ENST00000540122 ZSCAN32Q9NX65 697 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 COL1A2P08123 1366 aa17.65■□□□□ 0.42
PUDP-206ENST00000540122 A0A0U1RQF3 1178 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 SLC30A4O14863 429 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 CNPP09543 421 aaKnown RBP17.64■□□□□ 0.41
PUDP-206ENST00000540122 CYB5R4Q7L1T6 521 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 NETO1Q8TDF5 533 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 SHDQ96IW2 340 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 SDF4Q9BRK5 362 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 MAN1C1Q9NR34 630 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 KCNH7Q9NS40 1196 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 GMEB2Q9UKD1 530 aa17.64■□□□□ 0.41
PUDP-206ENST00000540122 CCDC195A0A1B0GUA6 201 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 ATG7O95352 703 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 C22orf31O95567 290 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 KCNA4P22459 653 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 HTR4Q13639 388 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 IMMTQ16891 758 aaKnown RBP17.63■□□□□ 0.41
PUDP-206ENST00000540122 ZNF484Q5JVG2 852 aa17.63■□□□□ 0.41
PUDP-206ENST00000540122 NELL1Q92832 810 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms