RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CETN1Q12798 172 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 IQCB1Q15051 598 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 TAF2Q6P1X5 1199 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 TSEN34Q9BSV6 310 aaKnown RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 RUSC1Q9BVN2 902 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 NFKBIZQ9BYH8 718 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 SLC39A2Q9NP94 309 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 DAAM1Q9Y4D1 1078 aa12.98□□□□□ -0.33
VTN-202ENST00000539746 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.98□□□□□ -0.33
VTN-202ENST00000539746 SMCHD1A6NHR9 2005 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 ARIH2O95376 493 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 LDHAP00338 332 aaKnown RBP12.97□□□□□ -0.33
VTN-202ENST00000539746 F2P00734 622 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 IGHA2P01877 340 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
VTN-202ENST00000539746 EPB41P11171 864 aaKnown RBP12.97□□□□□ -0.33
VTN-202ENST00000539746 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
VTN-202ENST00000539746 CDC25BP30305 580 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 GRK4P32298 578 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 PHKA2P46019 1235 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 TRIM14Q14142 442 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 PLCB4Q15147 1175 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 FKBP15Q5T1M5 1219 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 LUZP1Q86V48 1076 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 SFR1Q86XK3 245 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 TMEM134Q9H6X4 195 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 XPNPEP3Q9NQH7 507 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 PDGFCQ9NRA1 345 aa12.97□□□□□ -0.33
VTN-202ENST00000539746 MAPK13O15264 365 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 ZNF862O60290 1169 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 NCKAP1LP55160 1127 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 GTF2BQ00403 316 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 STK4Q13043 487 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 TARBP2Q15633 366 aaKnown RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 UGCGQ16739 394 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 GNASQ5JWF2 1037 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 SMYD5Q6GMV2 418 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 C11orf57Q6ZUT1 292 aaPredicted RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 ZNF410Q86VK4 478 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 DHX40Q8IX18 779 aaKnown RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 PRIMPOLQ96LW4 560 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 IMPACTQ9P2X3 320 aa12.96□□□□□ -0.33
VTN-202ENST00000539746 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
VTN-202ENST00000539746 KBTBD13C9JR72 458 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 K7ERI5 159 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 N4BP1O75113 896 aaKnown RBP12.95□□□□□ -0.34
VTN-202ENST00000539746 CAND2O75155 1236 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 PTMAP06454 111 aaKnown RBP12.95□□□□□ -0.34
VTN-202ENST00000539746 KRT13P13646 458 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 GSDMDP57764 484 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 MFSD10Q14728 455 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 MAPK6Q16659 721 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 CCDC40Q4G0X9 1142 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 PLA2G4FQ68DD2 849 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 ISM2Q6H9L7 571 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
VTN-202ENST00000539746 HAUS6Q7Z4H7 955 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 C12orf56Q8IXR9 622 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 CCDC155Q8N6L0 562 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 TRIB2Q92519 343 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
VTN-202ENST00000539746 BICD1Q96G01 975 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 TRIM17Q9Y577 477 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 LCTP09848 1927 aa12.95□□□□□ -0.34
VTN-202ENST00000539746 ZNFX1Q9P2E3 1918 aaKnown RBP12.95□□□□□ -0.34
VTN-202ENST00000539746 IGKV6-21A0A0C4DH24 114 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 C17orf102A2RUQ5 167 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 MYL3P08590 195 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 PSMC2P35998 433 aaKnown RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 ARL2P36404 184 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 MTIF2P46199 727 aaKnown RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 NPTX2P47972 431 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 NPEPPSP55786 919 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 PEX3P56589 373 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 UBASH3AP57075 661 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 POU5F1Q01860 360 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms