RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FAM186BQ8IYM0 893 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 SLC35G2Q8TBE7 412 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 GJA10Q969M2 543 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 SEC16BQ96JE7 1060 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 GPR101Q96P66 508 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 STMN4Q9H169 189 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-209ENST00000539584 TUFT1Q9NNX1 390 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
UBE3B-209ENST00000539584 ARFGEF1Q9Y6D6 1849 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
UBE3B-209ENST00000539584 STAT3P40763 770 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
UBE3B-209ENST00000539584 DR1Q01658 176 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 ERMARDQ5T6L9 678 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 RAPGEF5Q92565 580 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 MAGOHBQ96A72 148 aaKnown RBP14.38□□□□□ -0.11
UBE3B-209ENST00000539584 LENG9Q96B70 501 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 CCDC114Q96M63 670 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 SYT11Q9BT88 431 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 TMEM109Q9BVC6 243 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 PABPC3Q9H361 631 aaKnown RBP14.38□□□□□ -0.11
UBE3B-209ENST00000539584 BCCIPQ9P287 314 aaKnown RBP eCLIP14.38□□□□□ -0.11
UBE3B-209ENST00000539584 QSER1Q2KHR3 1735 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 MYH4Q9Y623 1939 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
UBE3B-209ENST00000539584 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 BUB1BO60566 1050 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 CHRNA3P32297 505 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 FMO5P49326 533 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 PSMC6P62333 389 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 VPS72Q15906 364 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 NBPF9Q3BBW0 867 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 BTNL9Q6UXG8 535 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 SMIM5Q71RC9 77 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 HS2ST1Q7LGA3 356 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 CPLX4Q7Z7G2 160 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 ANKS4BQ8N8V4 417 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 OR2W6PQ8NHA6 318 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 NEK9Q8TD19 979 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 CHMP6Q96FZ7 201 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 USP40Q9NVE5 1235 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 POLLQ9UGP5 575 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 FRMPD4Q14CM0 1322 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 MPHOSPH10O00566 681 aaKnown RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 ASAP2O43150 1006 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 TGFB1I1O43294 461 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 ITGA4P13612 1032 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 GTF2IP78347 998 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 FAM98CQ17RN3 349 aaKnown RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 ANKRD20A8PQ5CZ79 823 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 C6orf118Q5T5N4 469 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 C11orf63Q6NUN7 778 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 LNX1Q8TBB1 728 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 TMEM174Q8WUU8 243 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 DDX4Q9NQI0 724 aaKnown RBP14.37□□□□□ -0.11
UBE3B-209ENST00000539584 SYNPO2Q9UMS6 1093 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 FRMD4BQ9Y2L6 1034 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 PCDHB13Q9Y5F0 798 aa14.37□□□□□ -0.11
UBE3B-209ENST00000539584 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 FAM13AO94988 1023 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 MAP2K2P36507 400 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 CASP4P49662 377 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 MAPK7Q13164 816 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 XRCC4Q13426 336 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 DRAP1Q14919 205 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 KIAA1755Q5JYT7 1200 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 RINT1Q6NUQ1 792 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SLC9A9Q8IVB4 645 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SP8Q8IXZ3 490 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 UBL4BQ8N7F7 174 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 ATP8B4Q8TF62 1192 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SGSM3Q96HU1 749 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 GMCL1Q96IK5 515 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 TAOK3Q9H2K8 898 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 GOLPH3Q9H4A6 298 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 CCDC134Q9H6E4 229 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 PARVGQ9HBI0 331 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SLC40A1Q9NP59 571 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 ZDHHC18Q9NUE0 388 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 APEX2Q9UBZ4 518 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 DNAJC12Q9UKB3 198 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 ODF2LQ9ULJ1 636 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 C6orf229H3BNL8 230 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 P4HA2O15460 535 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-209ENST00000539584 AGTP01019 485 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 GSTA1P08263 222 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 BCRP11274 1271 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 TNFAIP3P21580 790 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 FLT3P36888 993 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 PMS2P54278 862 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 ITIH4Q14624 930 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 KIF22Q14807 665 aa14.36□□□□□ -0.11
UBE3B-209ENST00000539584 SLMAPQ14BN4 828 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms