RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 QARSP47897 775 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SLC7A5Q01650 507 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 NNTQ13423 1086 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 SPOPLQ6IQ16 392 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 PIGOQ8TEQ8 1089 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 FTOQ9C0B1 505 aaKnown RBP eCLIP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 UPF3AQ9H1J1 476 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ZWILCHQ9H900 591 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 DDX56Q9NY93 547 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 TBK1Q9UHD2 729 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CLGNO14967 610 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 MAP3K7O43318 606 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 LARGE1O95461 756 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 KRT7P08729 469 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ESRRAP11474 423 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 HOXD10P28358 340 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 ARL4CP56559 192 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 NSUN6Q8TEA1 469 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GIPC2Q8TF65 315 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
LSAMP-207ENST00000539563 CNOT8Q9UFF9 292 aaKnown RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 PACSIN2Q9UNF0 486 aaPredicted RBP6.94□□□□□ -1.3
LSAMP-207ENST00000539563 GRID2IPA4D2P6 1211 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 USP17L10C9JJH3 530 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ECE2O60344 883 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PALMO75781 387 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 NR3C1P04150 777 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 NCF2P19878 526 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PRCPP42785 496 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 FSCBQ5H9T9 825 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 RASIP1Q5U651 963 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CEP95Q96GE4 821 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF302Q9NR11 478 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ABT1Q9ULW3 272 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 HUS1O60921 280 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ZMYND10O75800 440 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KCNH2Q12809 1159 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CASP8Q14790 479 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 FRA10AC1Q70Z53 315 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PDCD7Q8N8D1 485 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 MCUQ8NE86 351 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 RUBCNQ92622 972 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 IFT43Q96FT9 208 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 AP1M1Q9BXS5 423 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 UBE4BO95155 1302 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SMIM24O75264 130 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CA4P22748 312 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ARPP19P56211 112 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SNAP25P60880 206 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CDO1Q16878 200 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 RWDD4Q6NW29 188 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PI16Q6UXB8 463 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 AIFM3Q96NN9 605 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 MMP19Q99542 508 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 NGRNQ9NPE2 291 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 OLA1Q9NTK5 396 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PFASO15067 1338 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 TNS3Q68CZ2 1445 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 C21orf2O43822 256 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KRT37O76014 449 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 IL1RL1Q01638 556 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 COASYQ13057 564 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 LRRC31Q6UY01 552 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 WDR75Q8IWA0 830 aaKnown RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 FBXL13Q8NEE6 735 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SPDYE1Q8NFV5 336 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 TUFT1Q9NNX1 390 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SLC13A4Q9UKG4 626 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 NEDD4P46934 1319 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SFI1A8K8P3 1242 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KPNA7A9QM74 516 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 MX2P20592 715 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KLHL38Q2WGJ6 581 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 RNF219Q5W0B1 726 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM67Q6ZTA4 783 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ADGRF4Q8IZF3 695 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ENAHQ8N8S7 591 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KLHL8Q9P2G9 620 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 LRRC7Q96NW7 1537 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 FOXP2O15409 715 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 PADI6Q6TGC4 694 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 MYLK4Q86YV6 388 aaPredicted RBP6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SYNE4Q8N205 404 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 ZBTB18Q99592 522 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 TMEM247A6NEH6 219 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 APOEP02649 317 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 CDR2Q01850 454 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 KIAA1755Q5JYT7 1200 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
LSAMP-207ENST00000539563 SLC12A1Q13621 1099 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 BANK1Q8NDB2 785 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SCG3Q8WXD2 468 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 DYDC2Q96IM9 177 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FSD1LQ9BXM9 530 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ADAMTS1Q9UHI8 967 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 MAGED2Q9UNF1 606 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms