RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SNX24Q9Y343 169 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 PRKCIP41743 596 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 PLTPP55058 493 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 POU5F1Q01860 360 aaKnown RBP22.03■■□□□ 1.12
TMEM260-203ENST00000539559 MKRN4PQ13434 485 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-203ENST00000539559 SLF2Q8IX21 1173 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 EIF1ADQ8N9N8 165 aaKnown RBP22.03■■□□□ 1.12
TMEM260-203ENST00000539559 OLIG1Q8TAK6 271 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 RUSC1Q9BVN2 902 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 MXD3Q9BW11 206 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 TMX4Q9H1E5 349 aaPredicted RBP22.03■■□□□ 1.12
TMEM260-203ENST00000539559 PCDHA1Q9Y5I3 950 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 LRRC37AA6NMS7 1700 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 NRXN2Q9P2S2 1712 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 SPATA31C1P0DKV0 1188 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 QRICH1Q2TAL8 776 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 PPP4R3CPQ6ZMV5 832 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 PARP9Q8IXQ6 854 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 BHMT2Q9H2M3 363 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 SLITRK6Q9H5Y7 841 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 GGA2Q9UJY4 613 aa22.03■■□□□ 1.12
TMEM260-203ENST00000539559 COG2Q14746 738 aa22.02■■□□□ 1.12
TMEM260-203ENST00000539559 GKAP1Q5VSY0 366 aaPredicted RBP22.02■■□□□ 1.12
TMEM260-203ENST00000539559 VPS36Q86VN1 386 aa22.02■■□□□ 1.12
TMEM260-203ENST00000539559 HVCN1Q96D96 273 aa22.02■■□□□ 1.12
TMEM260-203ENST00000539559 COA1Q9GZY4 146 aa22.02■■□□□ 1.12
TMEM260-203ENST00000539559 EPB41L4BQ9H329 900 aa22.02■■□□□ 1.12
TMEM260-203ENST00000539559 TPX2Q9ULW0 747 aaKnown RBP22.02■■□□□ 1.12
TMEM260-203ENST00000539559 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.02■■□□□ 1.12
TMEM260-203ENST00000539559 CHN1P15882 459 aa22.02■■□□□ 1.11
TMEM260-203ENST00000539559 GCFC2P16383 781 aaKnown RBP22.02■■□□□ 1.11
TMEM260-203ENST00000539559 PLCG2P16885 1265 aa22.02■■□□□ 1.11
TMEM260-203ENST00000539559 IFI35P80217 286 aaPredicted RBP22.02■■□□□ 1.11
TMEM260-203ENST00000539559 GABPAQ06546 454 aa22.02■■□□□ 1.11
TMEM260-203ENST00000539559 ZC2HC1CQ53FD0 456 aaPredicted RBP22.02■■□□□ 1.11
TMEM260-203ENST00000539559 CYP2W1Q8TAV3 490 aa22.02■■□□□ 1.11
TMEM260-203ENST00000539559 MASTLQ96GX5 879 aa22.02■■□□□ 1.11
TMEM260-203ENST00000539559 ZC3H12CQ9C0D7 883 aaKnown RBP22.02■■□□□ 1.11
TMEM260-203ENST00000539559 ATAD5Q96QE3 1844 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 IGKV6D-41A0A0C4DH26 115 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 TULP1O00294 542 aaPredicted RBP22.01■■□□□ 1.11
TMEM260-203ENST00000539559 RIMBP2O15034 1052 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 DDX3YO15523 660 aaKnown RBP22.01■■□□□ 1.11
TMEM260-203ENST00000539559 SLCO1A2P46721 670 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 GTF2IP78347 998 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 DR1Q01658 176 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 SPIRE1Q08AE8 756 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 MSL1Q68DK7 614 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 LMBR1Q8WVP7 490 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 XPO6Q96QU8 1125 aaKnown RBP22.01■■□□□ 1.11
TMEM260-203ENST00000539559 RGL1Q9NZL6 768 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 DNM3Q9UQ16 869 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 CALUO43852 315 aaPredicted RBP22.01■■□□□ 1.11
TMEM260-203ENST00000539559 PLCB4Q15147 1175 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 EPM2AIP1Q7L775 607 aaPredicted RBP22.01■■□□□ 1.11
TMEM260-203ENST00000539559 ALG3Q92685 438 aa22.01■■□□□ 1.11
TMEM260-203ENST00000539559 C5orf60A6NFR6 353 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 SRRM3A6NNA2 597 aaPredicted RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 ZBTB39O15060 712 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 NMT1P30419 496 aaKnown RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 LLGL1Q15334 1064 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 SNCBQ16143 134 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 ARHGAP44Q17R89 818 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 FBXO25Q8TCJ0 367 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 PIGOQ8TEQ8 1089 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 RNF25Q96BH1 459 aaPredicted RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 FAM163AQ96GL9 167 aaPredicted RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 THAP2Q9H0W7 228 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 ACTR5Q9H9F9 607 aaPredicted RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 FAM114A2Q9NRY5 505 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 LTBP1Q14766 1721 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 CCDC172P0C7W6 258 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 TRIM49P0CI25 452 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 TRIM49CP0CI26 452 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 KRT13P13646 458 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 DRAP1Q14919 205 aaPredicted RBP22■■□□□ 1.11
TMEM260-203ENST00000539559 USH1GQ495M9 461 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 CCT6BQ92526 530 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 C18orf8Q96DM3 657 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 AZI2Q9H6S1 392 aa22■■□□□ 1.11
TMEM260-203ENST00000539559 PITPNM2Q9BZ72 1349 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 TMEM110-MUSTN1A8MSY1 372 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 LRRN2O75325 713 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 PPFIA2O75334 1257 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 PAEPP09466 180 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 STAT1P42224 750 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 SCNN1DP51172 638 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 PPP1R18Q6NYC8 613 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 SYCE1Q8N0S2 351 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 SEC14L1Q92503 715 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 TLCD1Q96CP7 247 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 CHMP6Q96FZ7 201 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 GGT7Q9UJ14 662 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 COG5Q9UP83 839 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 FAM86B1E9PN63 330 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 PDXKO00764 312 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 TGFB1I1O43294 461 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 MMEP08473 750 aa21.99■■□□□ 1.11
TMEM260-203ENST00000539559 FAM86B2P0C5J1 330 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms