RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 PRPF31Q8WWY3 499 aaKnown RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 SEPT8Q92599 483 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 EPSTI1Q96J88 318 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
RPAIN-206ENST00000539417 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 SLC4A7Q9Y6M7 1214 aa17.56■□□□□ 0.4
RPAIN-206ENST00000539417 BMP15O95972 392 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 MYOGP15173 224 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 DDIT3P35638 169 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
RPAIN-206ENST00000539417 IKBKEQ14164 716 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 HYIQ5T013 277 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 CABP7Q86V35 215 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 ASAP3Q8TDY4 903 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 MTRQ99707 1265 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 BHMT2Q9H2M3 363 aa17.55■□□□□ 0.4
RPAIN-206ENST00000539417 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
RPAIN-206ENST00000539417 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
RPAIN-206ENST00000539417 MUTP22033 750 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 TMEM119Q4V9L6 283 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 PADI6Q6TGC4 694 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 NLRP7Q8WX94 980 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 NLRP4Q96MN2 994 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 ST3GAL5Q9UNP4 418 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 PPME1Q9Y570 386 aa17.54■□□□□ 0.4
RPAIN-206ENST00000539417 CHD7Q9P2D1 2997 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 ABHD14A-ACY1A0A1B0GW23 586 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 RPS6KA5O75582 802 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 DGAT1O75907 488 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 ARHGEF15O94989 841 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 ARL2P36404 184 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 LONP1P36776 959 aaKnown RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 DNM2P50570 870 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 LAMTOR4Q0VGL1 99 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 PAK2Q13177 524 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 KARSQ15046 597 aaKnown RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 STK38Q15208 465 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 PBX4Q9BYU1 374 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 MINDY3Q9H8M7 445 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 IFT122Q9HBG6 1241 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 YBX2Q9Y2T7 364 aaKnown RBP17.53■□□□□ 0.4
RPAIN-206ENST00000539417 COL4A3BPQ9Y5P4 624 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 SQORQ9Y6N5 450 aa17.53■□□□□ 0.4
RPAIN-206ENST00000539417 ARHGEF35A5YM69 484 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 ENPP3O14638 875 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 EYA4O95677 639 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 SRGAP2CP0DJJ0 459 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 DARSP14868 501 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 GLRA2P23416 452 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 EIF4BP23588 611 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 FAM117BQ6P1L5 589 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 PSPC1Q8WXF1 523 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 BSNDQ8WZ55 320 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 SYMPKQ92797 1274 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 AK8Q96MA6 479 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 CCDC43Q96MW1 224 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 ZNF396Q96N95 335 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 JPH2Q9BR39 696 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 RUSC1Q9BVN2 902 aa17.52■□□□□ 0.4
RPAIN-206ENST00000539417 POLR3FQ9H1D9 316 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 MTIF3Q9H2K0 278 aaKnown RBP17.52■□□□□ 0.4
RPAIN-206ENST00000539417 A0A087X0B3 334 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 SPTLC2O15270 562 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 PDIA4P13667 645 aaKnown RBP17.51■□□□□ 0.39
RPAIN-206ENST00000539417 CYP11B2P19099 503 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 SMAD3P84022 425 aaKnown RBP17.51■□□□□ 0.39
RPAIN-206ENST00000539417 CAPSQ13938 189 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 Q7L0L9 218 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 HERC6Q8IVU3 1022 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 APBB2Q92870 758 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 BLOC1S4Q9NUP1 217 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 DNM3Q9UQ16 869 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 STK24Q9Y6E0 443 aa17.51■□□□□ 0.39
RPAIN-206ENST00000539417 MORC2Q9Y6X9 1032 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-206ENST00000539417 YEATS4O95619 227 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 PLCG1P19174 1290 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 UBA7P41226 1012 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 KCNJ6P48051 423 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 SPRED2Q7Z698 418 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 KRI1Q8N9T8 703 aaKnown RBP17.5■□□□□ 0.39
RPAIN-206ENST00000539417 RNF149Q8NC42 400 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 NPHP3-ACAD11A0A0J9YXS1 232 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 LCHNA4D1U4 455 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 GAS2O43903 313 aaKnown RBP17.5■□□□□ 0.39
RPAIN-206ENST00000539417 UPP2O95045 317 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 DNAJB2P25686 324 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 SLC12A3P55017 1021 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms