RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 TOB1P50616 345 aaPredicted RBP17.52■□□□□ 0.4
CIT-210ENST00000539413 POLGP54098 1239 aaPredicted RBP17.52■□□□□ 0.4
CIT-210ENST00000539413 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 RHPN2Q8IUC4 686 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 FIBCD1Q8N539 461 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 NEK9Q8TD19 979 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 SLC7A3Q8WY07 619 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 JPH2Q9BR39 696 aaPredicted RBP17.52■□□□□ 0.4
CIT-210ENST00000539413 DHX33Q9H6R0 707 aaKnown RBP17.52■□□□□ 0.4
CIT-210ENST00000539413 PRDM6Q9NQX0 595 aa17.52■□□□□ 0.4
CIT-210ENST00000539413 A0A087WZ62 844 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
CIT-210ENST00000539413 LYPLA2O95372 231 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 STAG3L1P0CL83 205 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 FGFR4P22455 802 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 RFC5P40937 340 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 TECP42680 631 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 SARSP49591 514 aaKnown RBP17.51■□□□□ 0.39
CIT-210ENST00000539413 DSC3Q14574 896 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 EPC2Q52LR7 807 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 FBXO22Q8NEZ5 403 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 SAMD11Q96NU1 681 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
CIT-210ENST00000539413 C1orf112Q9NSG2 853 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 LRFN2Q9ULH4 789 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 PPME1Q9Y570 386 aa17.51■□□□□ 0.39
CIT-210ENST00000539413 A0A087WWV3 80 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 C9IYK1 514 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 LINC00271P0C7V0 271 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 GATMP50440 423 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 BTG3Q14201 252 aaPredicted RBP17.5■□□□□ 0.39
CIT-210ENST00000539413 MCTP1Q6DN14 999 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 FAM43BQ6ZT52 329 aaPredicted RBP17.5■□□□□ 0.39
CIT-210ENST00000539413 SLC24A5Q71RS6 500 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 TMEM192Q8IY95 271 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 TMEM143Q96AN5 459 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 NLRP4Q96MN2 994 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 GCOM2Q9BZD3 368 aaPredicted RBP17.5■□□□□ 0.39
CIT-210ENST00000539413 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
CIT-210ENST00000539413 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
CIT-210ENST00000539413 ARID2Q68CP9 1835 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 H3BQV1 296 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 MED24O75448 989 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 SPATA31C1P0DKV0 1188 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 EMC2Q15006 297 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 PAN2Q504Q3 1202 aaKnown RBP17.49■□□□□ 0.39
CIT-210ENST00000539413 ZNF410Q86VK4 478 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 PIGOQ8TEQ8 1089 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 PRPF31Q8WWY3 499 aaKnown RBP17.49■□□□□ 0.39
CIT-210ENST00000539413 ANKEF1Q9NU02 776 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 PCDHB7Q9Y5E2 793 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 COL4A3BPQ9Y5P4 624 aa17.49■□□□□ 0.39
CIT-210ENST00000539413 TTC3P53804 2025 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
CIT-210ENST00000539413 CTNNB1P35222 781 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 FAM189BP81408 668 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 CUL4AQ13619 759 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 CATSPER3Q86XQ3 398 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 CMTR2Q8IYT2 770 aaKnown RBP17.48■□□□□ 0.39
CIT-210ENST00000539413 PSPC1Q8WXF1 523 aaKnown RBP17.48■□□□□ 0.39
CIT-210ENST00000539413 MTRQ99707 1265 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 TUFT1Q9NNX1 390 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 XPNPEP1Q9NQW7 623 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 MRPL42Q9Y6G3 142 aaKnown RBP17.48■□□□□ 0.39
CIT-210ENST00000539413 TRANK1O15050 2925 aa17.48■□□□□ 0.39
CIT-210ENST00000539413 H3BNC9 293 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 GAS2O43903 313 aaKnown RBP17.47■□□□□ 0.39
CIT-210ENST00000539413 BMPR1AP36894 532 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 RARRES1P49788 294 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 PTGDRQ13258 359 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 GPM6BQ13491 265 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 FAM102BQ5T8I3 360 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 LARP1BQ659C4 914 aaKnown RBP17.47■□□□□ 0.39
CIT-210ENST00000539413 TCP11Q8WWU5 503 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 CLP1Q92989 425 aaKnown RBP17.47■□□□□ 0.39
CIT-210ENST00000539413 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
CIT-210ENST00000539413 IFT122Q9HBG6 1241 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 LMCD1Q9NZU5 365 aa17.47■□□□□ 0.39
CIT-210ENST00000539413 RALGAPA2Q2PPJ7 1873 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 NLRC5Q86WI3 1866 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 C5orf67F2Z3F1 127 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 FGFR1P11362 822 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 SFPQP23246 707 aaKnown RBP eCLIP17.46■□□□□ 0.39
CIT-210ENST00000539413 FXR2P51116 673 aaKnown RBP eCLIP17.46■□□□□ 0.39
CIT-210ENST00000539413 LAMTOR4Q0VGL1 99 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 POTEGQ6S5H5 508 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 ERMNQ8TAM6 284 aa17.46■□□□□ 0.39
CIT-210ENST00000539413 CCDC43Q96MW1 224 aaKnown RBP17.46■□□□□ 0.39
CIT-210ENST00000539413 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
CIT-210ENST00000539413 ELAC1Q9H777 363 aaKnown RBP17.46■□□□□ 0.39
CIT-210ENST00000539413 ATP6V0A4Q9HBG4 840 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms