RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ADRB1P08588 477 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 CTSAP10619 480 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 SRFP11831 508 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 KLRC2P26717 231 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
YBX3-207ENST00000539204 POLGP54098 1239 aaPredicted RBP13.75□□□□□ -0.21
YBX3-207ENST00000539204 ACTR2P61160 394 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 LMNB2Q03252 620 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
YBX3-207ENST00000539204 ECHDC2Q86YB7 292 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 FEZF2Q8TBJ5 459 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 ATRIPQ8WXE1 791 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 PPP1R16BQ96T49 567 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
YBX3-207ENST00000539204 MRPL9Q9BYD2 267 aaKnown RBP13.75□□□□□ -0.21
YBX3-207ENST00000539204 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 SDSP20132 328 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 PTPN14Q15678 1187 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 ZNF484Q5JVG2 852 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 HELQQ8TDG4 1101 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 GPR152Q8TDT2 470 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 STAMQ92783 540 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
YBX3-207ENST00000539204 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 ATRXP46100 2492 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 CACNA1IQ9P0X4 2223 aa13.74□□□□□ -0.21
YBX3-207ENST00000539204 ERICH2A1L162 156 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 SPTLC1O15269 473 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 GPR32O75388 356 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 ATG7O95352 703 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 TROAPQ12815 778 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 DCLRE1AQ6PJP8 1040 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
YBX3-207ENST00000539204 METTL13Q8N6R0 699 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 IGSF21Q96ID5 467 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 EMILIN2Q9BXX0 1053 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 ARHGEF3Q9NR81 526 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 EPS15L1Q9UBC2 864 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
YBX3-207ENST00000539204 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
YBX3-207ENST00000539204 NFASCO94856 1347 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 A0A0U1RQF3 1178 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 POTEMA6NI47 508 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 BACH1O14867 736 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
YBX3-207ENST00000539204 LAMTOR5O43504 91 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
YBX3-207ENST00000539204 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
YBX3-207ENST00000539204 VTNP04004 478 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 CLCN4P51793 760 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 TRDNQ13061 729 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 FAM160B1Q5W0V3 765 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 POTEGQ6S5H5 508 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 CWC27Q6UX04 472 aaKnown RBP13.72□□□□□ -0.21
YBX3-207ENST00000539204 SHDQ96IW2 340 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 KLHL5Q96PQ7 755 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 MXRA8Q9BRK3 442 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 WDR6Q9NNW5 1121 aaKnown RBP13.72□□□□□ -0.21
YBX3-207ENST00000539204 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 PCDHGA2Q9Y5H1 932 aa13.72□□□□□ -0.21
YBX3-207ENST00000539204 COL1A2P08123 1366 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 CCDC195A0A1B0GUA6 201 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 GLULP15104 373 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.21
YBX3-207ENST00000539204 CSTF1Q05048 431 aaKnown RBP13.71□□□□□ -0.21
YBX3-207ENST00000539204 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
YBX3-207ENST00000539204 PJA1Q8NG27 643 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 BCO2Q9BYV7 579 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 FOXQ1Q9C009 403 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 SPATA6Q9NWH7 488 aaPredicted RBP13.71□□□□□ -0.21
YBX3-207ENST00000539204 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 DPP7Q9UHL4 492 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 USP18Q9UMW8 372 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 PCDHA6Q9UN73 950 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 PCDHA8Q9Y5H6 950 aa13.71□□□□□ -0.21
YBX3-207ENST00000539204 FANCMQ8IYD8 2048 aa13.71□□□□□ -0.22
YBX3-207ENST00000539204 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 GALTP07902 379 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 NLRP11P59045 1033 aaKnown RBP13.7□□□□□ -0.22
YBX3-207ENST00000539204 STARD6P59095 220 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
YBX3-207ENST00000539204 WTAPQ15007 396 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 PDXDC2PQ6P474 469 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
YBX3-207ENST00000539204 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
YBX3-207ENST00000539204 RSPH1Q8WYR4 309 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms