RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 DAGLBQ8NCG7 672 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 PANK4Q9NVE7 773 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 SRPRBQ9Y5M8 271 aaKnown RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 MBD3O95983 291 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 CYBAP13498 195 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 RTP1P59025 263 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 TPM4P67936 248 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 SLC20A2Q08357 652 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 IRF5Q13568 498 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 UGCGQ16739 394 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 HAS1Q92839 578 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 DICER1Q9UPY3 1922 aaKnown RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 A0A1W2PQ45 241 aaPredicted RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 A0A1W2PQY0 241 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 RSPH10B2B2RC85 870 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 RGS20O76081 388 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 RSPH10BP0C881 870 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 CCDC40Q4G0X9 1142 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 ICE2Q659A1 982 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 ADALQ6DHV7 355 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 PRPF31Q8WWY3 499 aaKnown RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 DDX12PQ92771 950 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 SENP7Q9BQF6 1050 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 CERS4Q9HA82 394 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
GGA3-202ENST00000538886 PCDHB13Q9Y5F0 798 aa9.66□□□□□ -0.86
GGA3-202ENST00000538886 A0A087WZ62 844 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 CLIC2O15247 247 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 HOXC6P09630 235 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 KCNA2P16389 499 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 BFSP2Q13515 415 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 EMC2Q15006 297 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 SAMD3Q8N6K7 520 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 ATP8B4Q8TF62 1192 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 POMGNT1Q8WZA1 660 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 FDXACB1Q9BRP7 624 aaPredicted RBP9.65□□□□□ -0.86
GGA3-202ENST00000538886 CYP26B1Q9NR63 512 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 DNAJC25-GNG10A0A024R161 153 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 GOLGA8IPA6NC78 632 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 GOLGA8JA6NMD2 632 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 TRIM66O15016 1216 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 ARHGAP1Q07960 439 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 BIRC3Q13489 604 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 ANKRD20A12PQ8NF67 263 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 RPS6KC1Q96S38 1066 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 GCOM2Q9BZD3 368 aaPredicted RBP9.65□□□□□ -0.86
GGA3-202ENST00000538886 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.86
GGA3-202ENST00000538886 ASTN1O14525 1302 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 HIP1RO75146 1068 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 PRPF6O94906 941 aaKnown RBP9.65□□□□□ -0.87
GGA3-202ENST00000538886 DLATP10515 647 aaKnown RBP9.65□□□□□ -0.87
GGA3-202ENST00000538886 MYH7P12883 1935 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 MAPK6Q16659 721 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 SEZ6Q53EL9 994 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 ARL6IP4Q66PJ3 421 aaKnown RBP9.65□□□□□ -0.87
GGA3-202ENST00000538886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.87
GGA3-202ENST00000538886 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 COL4A3BPQ9Y5P4 624 aa9.65□□□□□ -0.87
GGA3-202ENST00000538886 GSTTP1A0A1W2PQM5 241 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 SLITRK3O94933 977 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 USP8P40818 1118 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 PAK2Q13177 524 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 DCAF17Q5H9S7 520 aaPredicted RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 LMBR1Q8WVP7 490 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 AK8Q96MA6 479 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 TSG101Q99816 390 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 PARVGQ9HBI0 331 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 SMCHD1A6NHR9 2005 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 EXOC3O60645 756 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 Q4G0T1 1027 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 TBX3O15119 743 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 ADCY6O43306 1168 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 KPNA6O60684 536 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 NMT1P30419 496 aaKnown RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 ATL3Q6DD88 541 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 SYT10Q6XYQ8 523 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 ZNF333Q96JL9 665 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 NCAPGQ9BPX3 1015 aa9.64□□□□□ -0.87
GGA3-202ENST00000538886 PYM1Q9BRP8 204 aaKnown RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 MTIF3Q9H2K0 278 aaKnown RBP9.64□□□□□ -0.87
GGA3-202ENST00000538886 CDK5RAP2Q96SN8 1893 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 PSMD10O75832 226 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 DGAT1O75907 488 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 CABYRO75952 493 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 PHKA2P46019 1235 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 NPY5RQ15761 445 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms