RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CPP00450 1065 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 LRRC63Q05C16 580 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 LRRC8AQ8IWT6 810 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 XXYLT1Q8NBI6 393 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 TDRD7Q8NHU6 1098 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 DPF3Q92784 378 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 MAGOHBQ96A72 148 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 TYW1Q9NV66 732 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 CPA4Q9UI42 421 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PIK3R2O00459 728 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 RGL2O15211 777 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 MOCS2O96007 188 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 SERPING1P05155 500 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 MYBP10242 640 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 RECQLP46063 649 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PPP6R3Q5H9R7 873 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 MAP1SQ66K74 1059 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 LMBRD2Q68DH5 695 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 RUFY4Q6ZNE9 571 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 CDKL2Q92772 493 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 OPTNQ96CV9 577 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 CFAP57Q96MR6 1250 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 NDST4Q9H3R1 872 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 SMARCAD1Q9H4L7 1026 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 NHEJ1Q9H9Q4 299 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 SPTLC3Q9NUV7 552 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 MKRN1Q9UHC7 482 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 DNAJC12Q9UKB3 198 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 RCOR1Q9UKL0 485 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 NCOA3Q9Y6Q9 1424 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 A8MXQ7 604 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 F5H423 210 aaPredicted RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 PRR29P0C7W0 189 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 EIF4A3P38919 411 aaKnown RBP5.77□□□□□ -1.49
LRP6-203ENST00000538239 GNASQ5JWF2 1037 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 MB21D1Q8N884 522 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 KIAA1586Q9HCI6 787 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 PCDHB7Q9Y5E2 793 aa5.77□□□□□ -1.49
LRP6-203ENST00000538239 NEMP1O14524 444 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RPS6KA5O75582 802 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 LCP1P13796 627 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CXCR5P32302 372 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 SOX5P35711 763 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CPT1AP50416 773 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 USP11P51784 963 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 VAMP7P51809 220 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RNF180Q86T96 592 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RBAKQ9NYW8 714 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 HPCAL4Q9UM19 191 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RFX7Q2KHR2 1363 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 UBE4BO95155 1302 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CEP55Q53EZ4 464 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 TSC1Q92574 1164 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.76□□□□□ -1.49
LRP6-203ENST00000538239 TTC1Q99614 292 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 NYAP2Q9P242 653 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 WDR19Q8NEZ3 1342 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 EIF3CLB5ME19 914 aaKnown RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 ZNF609O15014 1411 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CAPN15O75808 1086 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RASA1P20936 1047 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 RGS2P41220 211 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 VEPH1Q14D04 833 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PDIA6Q15084 440 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 DGKDQ16760 1214 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 IER5Q5VY09 327 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CCDC62Q6P9F0 684 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 GPD1LQ8N335 351 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 FBXO41Q8TF61 875 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 STMN2Q93045 179 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 ATP6V1E2Q96A05 226 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 EIF3CQ99613 913 aaKnown RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 AGO2Q9UKV8 859 aaKnown RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 SOWAHDA6NJG2 315 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 WHAMMP3Q1A5X7 153 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 SPATA2LQ8IUW3 424 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 AKT1S1Q96B36 256 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 NRBP1Q9UHY1 535 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 EBAG9O00559 213 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 STX2P32856 288 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PDE1BQ01064 536 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CUL4AQ13619 759 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PPP1R2P3Q6NXS1 205 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 CC2D1AQ6P1N0 951 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 ACRBPQ8NEB7 543 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 IRF1P10914 325 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PDHBP11177 359 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 ATN1P54259 1190 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 SLC12A1Q13621 1099 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 EPHA7Q15375 998 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 KNOP1Q1ED39 458 aaKnown RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 SBK1Q52WX2 424 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PLA2G4FQ68DD2 849 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 EFCAB13Q8IY85 973 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 LRRC71Q8N4P6 559 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 FHDC1Q9C0D6 1143 aaPredicted RBP5.76□□□□□ -1.49
LRP6-203ENST00000538239 HAUS4Q9H6D7 363 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 FIS1Q9Y3D6 152 aa5.76□□□□□ -1.49
LRP6-203ENST00000538239 PCDHA13Q9Y5I0 950 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms