RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BMP8BP34820 402 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 ARL2P36404 184 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
CHFR-216ENST00000538235 NLRP11P59045 1033 aaKnown RBP14.58□□□□□ -0.08
CHFR-216ENST00000538235 DEFB103AP81534 67 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
CHFR-216ENST00000538235 CAPSQ13938 189 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 MCM6Q14566 821 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 PLEKHG4Q58EX7 1191 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 ARSHQ5FYA8 562 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 PADI6Q6TGC4 694 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 TMEM199Q8N511 208 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 CCDC155Q8N6L0 562 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 DBF4BQ8NFT6 615 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 NACC1Q96RE7 527 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 MTRQ99707 1265 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 UBE2OQ9C0C9 1292 aaKnown RBP14.58□□□□□ -0.08
CHFR-216ENST00000538235 POLR3FQ9H1D9 316 aaPredicted RBP14.58□□□□□ -0.08
CHFR-216ENST00000538235 GOLPH3LQ9H4A5 285 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 IFT122Q9HBG6 1241 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 AKT3Q9Y243 479 aa14.58□□□□□ -0.08
CHFR-216ENST00000538235 SZT2Q5T011 3432 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 TRIP11Q15643 1979 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 A0A087WZ62 844 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 DKC1O60832 514 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHFR-216ENST00000538235 CUTAO60888 179 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 PDIA4P13667 645 aaKnown RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 NCLP19338 710 aaKnown RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 RFC5P40937 340 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 NUCB2P80303 420 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 PPIGQ13427 754 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■■□□ 16.2
CHFR-216ENST00000538235 RINT1Q6NUQ1 792 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 C1orf186Q6ZWK4 172 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 OTOP2Q7RTS6 562 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 RTN4RL1Q86UN2 441 aaPredicted RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 RETREG2Q8NC44 543 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 LBHD1Q9BQE6 289 aaPredicted RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 FDXACB1Q9BRP7 624 aaPredicted RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 KIFC3Q9BVG8 833 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 PANK2Q9BZ23 570 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 RAB34Q9BZG1 259 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 ERVK-5Q9HDB9 667 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 SUCLA2Q9P2R7 463 aaPredicted RBP14.57□□□□□ -0.08
CHFR-216ENST00000538235 GINS2Q9Y248 185 aa14.57□□□□□ -0.08
CHFR-216ENST00000538235 ARHGEF35A5YM69 484 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 DGAT1O75907 488 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 PLA2G4BP0C869 781 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 XRCC6P12956 609 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHFR-216ENST00000538235 CYP11B2P19099 503 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 KRT85P78386 507 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 RAD51AP2Q09MP3 1159 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 LAMTOR4Q0VGL1 99 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 RESP18Q5W5W9 173 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.56□□□□□ -0.08
CHFR-216ENST00000538235 RHPN2Q8IUC4 686 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 PDILTQ8N807 584 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 RAD54LQ92698 747 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 TNPO1Q92973 898 aaKnown RBP14.56□□□□□ -0.08
CHFR-216ENST00000538235 NLRP4Q96MN2 994 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
CHFR-216ENST00000538235 COL4A3BPQ9Y5P4 624 aa14.56□□□□□ -0.08
CHFR-216ENST00000538235 PDCD11Q14690 1871 aaKnown RBP14.55□□□□□ -0.08
CHFR-216ENST00000538235 ARHGEF15O94989 841 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 DARSP14868 501 aaKnown RBP14.55□□□□□ -0.08
CHFR-216ENST00000538235 RFC2P35250 354 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 UBA7P41226 1012 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 ATL3Q6DD88 541 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 TSHZ1Q6ZSZ6 1077 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 OTUD6AQ7L8S5 288 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 TDHQ8IZJ6 230 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 SYT2Q8N9I0 419 aaPredicted RBP14.55□□□□□ -0.08
CHFR-216ENST00000538235 KCNG4Q8TDN1 519 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 SLC7A3Q8WY07 619 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 HERVK_113Q902F9 699 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 IPO9Q96P70 1041 aaKnown RBP14.55□□□□□ -0.08
CHFR-216ENST00000538235 PADI3Q9ULW8 664 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 USP20Q9Y2K6 914 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 PPME1Q9Y570 386 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 ANK1P16157 1881 aa14.55□□□□□ -0.08
CHFR-216ENST00000538235 CDH23Q9H251 3354 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 HIP1RO75146 1068 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 CASP1P29466 404 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 ME1P48163 572 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 CRYBB1P53674 252 aaPredicted RBP14.54□□□□□ -0.08
CHFR-216ENST00000538235 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
CHFR-216ENST00000538235 DHX8Q14562 1220 aaKnown RBP14.54□□□□□ -0.08
CHFR-216ENST00000538235 DSC3Q14574 896 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 AMHR2Q16671 573 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 CNKSR3Q6P9H4 555 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 TAS1R3Q7RTX0 852 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 SPRED2Q7Z698 418 aa14.54□□□□□ -0.08
CHFR-216ENST00000538235 NME8Q8N427 588 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms