RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 LAG3P18627 525 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 EIF4BP23588 611 aaKnown RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 STK3Q13188 491 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 SMAD4Q13485 552 aaKnown RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 TOB2Q14106 344 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 CLUL1Q15846 466 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 Q4G0T1 1027 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 PDE12Q6L8Q7 609 aaKnown RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 KRT25Q7Z3Z0 450 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 FAM228AQ86W67 206 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 HS6ST3Q8IZP7 471 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 TMEM40Q8WWA1 233 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 SLC5A5Q92911 643 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 LENG9Q96B70 501 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 JPH2Q9BR39 696 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 DACT1Q9NYF0 836 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 SEPT9Q9UHD8 586 aaPredicted RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
CCDC170-202ENST00000537358 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
CCDC170-202ENST00000537358 CCDC194A0A1B0GVG4 234 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 DCXO43602 365 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 MARCH6O60337 910 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 MGEA5O60502 916 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 DKC1O60832 514 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 PPM1AP35813 382 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 GATMP50440 423 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 ZP2Q05996 745 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 ADAM15Q13444 863 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 BMS1Q14692 1282 aaKnown RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 SMAD2Q15796 467 aaKnown RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 FAM102BQ5T8I3 360 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 EFHBQ8N7U6 833 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 DAGLBQ8NCG7 672 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 CDCA3Q99618 268 aaPredicted RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 GCOM2Q9BZD3 368 aaPredicted RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 INO80BQ9C086 356 aaPredicted RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 TMEM117Q9H0C3 514 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 UNC45AQ9H3U1 944 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 TLE6Q9H808 572 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 CD320Q9NPF0 282 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 TLR9Q9NR96 1032 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 DDX25Q9UHL0 483 aaKnown RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 RAPGEFL1Q9UHV5 662 aa11.06□□□□□ -0.64
CCDC170-202ENST00000537358 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
CCDC170-202ENST00000537358 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 PRR33A8MZF0 331 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 ADAMTS3O15072 1205 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 MBTPS2O43462 519 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 ZNF862O60290 1169 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 EIF5BO60841 1220 aaKnown RBP11.05□□□□□ -0.64
CCDC170-202ENST00000537358 PSMD10O75832 226 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 FGF18O76093 207 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 CYP3A7P24462 503 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 LTBRP36941 435 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 PLA2G5P39877 138 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 NRIP1P48552 1158 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 GPC3P51654 580 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 FAM189BP81408 668 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 KRT17Q04695 432 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 MTERF2Q49AM1 385 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
CCDC170-202ENST00000537358 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 LRRC43Q8N309 656 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 COLGALT1Q8NBJ5 622 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
CCDC170-202ENST00000537358 ENTPD7Q9NQZ7 604 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 TYW1Q9NV66 732 aaKnown RBP11.05□□□□□ -0.64
CCDC170-202ENST00000537358 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
CCDC170-202ENST00000537358 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 TBX10O75333 385 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 EOMESO95936 686 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 FGFR1P11362 822 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 SKIP12755 728 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 DARSP14868 501 aaKnown RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 GCFC2P16383 781 aaKnown RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 SFPQP23246 707 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 DNAJB1P25685 340 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 DLX2Q07687 328 aaPredicted RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 CAMK1Q14012 370 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 DSC3Q14574 896 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 ANKRD1Q15327 319 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 LINC01465Q8N7H1 131 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 WASF1Q92558 559 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 ZNF558Q96NG5 402 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms