RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 FAM189BP81408 668 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 EXOSC10Q01780 885 aaKnown RBP10.09□□□□□ -0.79
SMAD3-203ENST00000537194 SMC1AQ14683 1233 aaKnown RBP10.09□□□□□ -0.79
SMAD3-203ENST00000537194 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 ANKRD54Q6NXT1 300 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 LLGL2Q6P1M3 1020 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 RASGRP4Q8TDF6 673 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 TMEM40Q8WWA1 233 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 NLRP7Q8WX94 980 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 TMEM169Q96HH4 297 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 RIPOR3Q96MK2 946 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-203ENST00000537194 ZMYND12Q9H0C1 365 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 DISC1Q9NRI5 854 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 CACNA1HO95180 2353 aa10.09□□□□□ -0.79
SMAD3-203ENST00000537194 C5orf42Q9H799 3197 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 IGLV3-22A0A075B6J6 115 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 FSCN2O14926 492 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 DHX15O43143 795 aaKnown RBP10.08□□□□□ -0.8
SMAD3-203ENST00000537194 GPR32O75388 356 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 CDC45O75419 566 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 OATP04181 439 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 SFPQP23246 707 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMAD3-203ENST00000537194 PSMA5P28066 241 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 CDC27P30260 824 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 MTHFRP42898 656 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 USP11P51784 963 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 NUBP1P53384 320 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 ERVFC1P60507 584 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 ITIH3Q06033 890 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 FUT2Q10981 343 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 GIT2Q14161 759 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 ECHDC2Q86YB7 292 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 SUSD6Q92537 303 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 JPH2Q9BR39 696 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-203ENST00000537194 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 GCOM2Q9BZD3 368 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-203ENST00000537194 CWH43Q9H720 699 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 PCDHGC5Q9Y5F6 944 aa10.08□□□□□ -0.8
SMAD3-203ENST00000537194 A0A0U1RQF3 1178 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 ZBTB42B2RXF5 422 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 PRPF3O43395 683 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CHMP2AO43633 222 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 ATP4AP20648 1035 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CIITAP33076 1130 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 ADD1P35611 737 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 NLRP5P59047 1200 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 PRKCEQ02156 737 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 APOBRQ0VD83 1088 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 MTMR3Q13615 1198 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 DSC3Q14574 896 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 LRCH2Q5VUJ6 765 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 TWF2Q6IBS0 349 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CPLX2Q6PUV4 134 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 Q6ZUG5 572 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 UBALD2Q8IYN6 164 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 LRRC71Q8N4P6 559 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 RDM1Q8NG50 284 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 ATOH1Q92858 354 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 JAKMIP1Q96N16 626 aaKnown RBP10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CASD1Q96PB1 797 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 RIT2Q99578 217 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 APOL5Q9BWW9 433 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CHST12Q9NRB3 414 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 DZANK1Q9NVP4 752 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 STK39Q9UEW8 545 aa10.07□□□□□ -0.8
SMAD3-203ENST00000537194 CPLX1O14810 134 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 ST18O60284 1047 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 DKC1O60832 514 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 CXCL14O95715 111 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 DARSP14868 501 aaKnown RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 SP100P23497 879 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 RAB27AP51159 221 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 GPC3P51654 580 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 ATAT1Q5SQI0 421 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 GLB1LQ6UWU2 654 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 EXOC8Q8IYI6 725 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 MRPL43Q8N983 215 aaKnown RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 HELQQ8TDG4 1101 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 BRF1Q92994 677 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 PGBD4Q96DM1 585 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 FAM193BQ96PV7 902 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 SLC26A6Q9BXS9 759 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 MFSD1Q9H3U5 465 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms