RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 RMDN3Q96TC7 470 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 THAP9Q9H5L6 903 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.24
SPG11-203ENST00000535302 KDM6BO15054 1643 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 EXOC1LA0A1B0GW35 172 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 ESRRGP62508 458 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 ZBTB17Q13105 803 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.25
SPG11-203ENST00000535302 EDEM3Q9BZQ6 932 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 NDUFA10O95299 355 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 IFNAR1P17181 557 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 NME3Q13232 169 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.25
SPG11-203ENST00000535302 HIF1AQ16665 826 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 ZC4H2Q9NQZ6 224 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 ATXN3P54252 364 aaPredicted RBP13.52□□□□□ -0.25
SPG11-203ENST00000535302 NNTQ13423 1086 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 NFU1Q9UMS0 254 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
SPG11-203ENST00000535302 CCNE1P24864 410 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 POTECB2RU33 542 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 ZNF500O60304 480 aaPredicted RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 SPAG7O75391 227 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 GPSM2P81274 684 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 TRIM11Q96F44 468 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 COA1Q9GZY4 146 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 DNAJC12Q9UKB3 198 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 CYP27B1O15528 508 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 NCK2O43639 380 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 ZBED1O96006 694 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 LMNB2Q03252 620 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 RNF219Q5W0B1 726 aaPredicted RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 PARD6BQ9BYG5 372 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 PALMO75781 387 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 SEC24DO94855 1032 aaPredicted RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 FGGP02679 453 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 AP1ARQ63HQ0 302 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 SAAL1Q96ER3 474 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 ERVV-1B6SEH8 477 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 KCNQ2O43526 872 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 PSMC5P62195 406 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 CEP95Q96GE4 821 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 TTC1Q99614 292 aa13.51□□□□□ -0.25
SPG11-203ENST00000535302 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.257e-9■■■□□ 17.9
SPG11-203ENST00000535302 MRPL47Q9HD33 250 aaKnown RBP13.51□□□□□ -0.25
SPG11-203ENST00000535302 ESRRAP11474 423 aaPredicted RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 EPHB4P54760 987 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 SWSAP1Q6NVH7 229 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 POTEEQ6S8J3 1075 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 SH2D3AQ9BRG2 576 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 SLC13A1Q9BZW2 595 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 CLCA2Q9UQC9 943 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 IKBKBO14920 756 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 HSPA4LO95757 839 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ZC3H18Q86VM9 953 aaKnown RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.255e-7■■■□□ 18.9
SPG11-203ENST00000535302 CCDC78A2IDD5 438 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
SPG11-203ENST00000535302 LMBRD2Q68DH5 695 aaPredicted RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 TMEM270Q6UE05 265 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 TRIML2Q8N7C3 387 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ABHD8Q96I13 439 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ELAC2Q9BQ52 826 aaKnown RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 PCSK1NQ9UHG2 260 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 RCOR1Q9UKL0 485 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 ADORA2BP29275 332 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 CDC27P30260 824 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.251e-8■■■■■ 58.8
SPG11-203ENST00000535302 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
SPG11-203ENST00000535302 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
SPG11-203ENST00000535302 IGKV5-2P06315 115 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms