RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 TREML2Q5T2D2 321 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 DIEXFQ68CQ4 756 aaKnown RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 NAA16Q6N069 864 aaPredicted RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 CEP85Q6P2H3 762 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 TTLL10Q6ZVT0 673 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 REC114Q7Z4M0 266 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 TTC6Q86TZ1 520 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 METTL16Q86W50 562 aaKnown RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 CREG2Q8IUH2 290 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 FTSJ3Q8IY81 847 aaKnown RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 RAET1EQ8TD07 263 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 RNF141Q8WVD5 230 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 EAF2Q96CJ1 260 aaPredicted RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 SHISA4Q96DD7 197 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 VWCEQ96DN2 955 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 PPP1R16BQ96T49 567 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 CCDC8Q9H0W5 538 aaPredicted RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 ADAMTS10Q9H324 1103 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 PIH1D3Q9NQM4 214 aaKnown RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 AATFQ9NY61 560 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATM-224ENST00000534625 PI4KBQ9UBF8 816 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 GABRQQ9UN88 632 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 MGAMO43451 1857 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 BAG3O95817 575 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 KRT1P04264 644 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 C1QTNF9P0C862 333 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 HMGCS2P54868 508 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 PWP1Q13610 501 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 SHROOM1Q2M3G4 852 aaPredicted RBP6.29□□□□□ -1.4
ATM-224ENST00000534625 FBXL19Q6PCT2 694 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
ATM-224ENST00000534625 MAPKAPK5Q8IW41 473 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 CCDC120Q96HB5 630 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 KREMEN1Q96MU8 473 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 CDK5RAP2Q96SN8 1893 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 NOL10Q9BSC4 688 aaKnown RBP6.29□□□□□ -1.4
ATM-224ENST00000534625 DHX36Q9H2U1 1008 aaKnown RBP6.29□□□□□ -1.4
ATM-224ENST00000534625 DNAJC18Q9H819 358 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 KLHL3Q9UH77 587 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 HERC5Q9UII4 1024 aaKnown RBP6.29□□□□□ -1.4
ATM-224ENST00000534625 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 SIPA1L1O43166 1804 aa6.29□□□□□ -1.4
ATM-224ENST00000534625 FLT1P17948 1338 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 ZBED9Q6R2W3 1325 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 ATAD5Q96QE3 1844 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 TLR3O15455 904 aaKnown RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 ADCY3O60266 1144 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 GREM1O60565 184 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 IGSF3O75054 1194 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 HPXP02790 462 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 GJB1P08034 283 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 CCL5P13501 91 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 GJA8P48165 433 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 FLT3LGP49771 235 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 HK2P52789 917 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 DYNLL1P63167 89 aaKnown RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 FAM110CQ1W6H9 321 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 HABP4Q5JVS0 413 aaKnown RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 SNAP47Q5SQN1 464 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 UBE2Q1Q7Z7E8 422 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 FOXP4Q8IVH2 680 aaPredicted RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 SMCR8Q8TEV9 937 aaPredicted RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 TRIT1Q9H3H1 467 aaKnown RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 KCNK12Q9HB15 430 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 SAP30BPQ9UHR5 308 aaKnown RBP6.28□□□□□ -1.4
ATM-224ENST00000534625 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 EXOC6BQ9Y2D4 811 aa6.28□□□□□ -1.4
ATM-224ENST00000534625 FOCADQ5VW36 1801 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 SHISA3A0PJX4 238 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 TNPO2O14787 897 aaKnown RBP6.27□□□□□ -1.41
ATM-224ENST00000534625 IDH1O75874 414 aaKnown RBP6.27□□□□□ -1.41
ATM-224ENST00000534625 ASNSP08243 561 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 HOXA7P31268 230 aaPredicted RBP6.27□□□□□ -1.41
ATM-224ENST00000534625 GCLCP48506 637 aaPredicted RBP6.27□□□□□ -1.41
ATM-224ENST00000534625 BACE1P56817 501 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 UBXN2AP68543 259 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 MRPL58Q14197 206 aaKnown RBP6.27□□□□□ -1.41
ATM-224ENST00000534625 AACSQ86V21 672 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 ERC1Q8IUD2 1116 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 SIRT2Q8IXJ6 389 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 MAGEB6Q8N7X4 407 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 MIGA1Q8NAN2 632 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 KIF2CQ99661 725 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 AS3MTQ9HBK9 375 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 GINM1Q9NU53 330 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 GPATCH2Q9NW75 528 aa6.27□□□□□ -1.41
ATM-224ENST00000534625 GJD2Q9UKL4 321 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms