RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 SEPT9Q9UHD8 586 aaPredicted RBP10.02□□□□□ -0.81
COPB1-211ENST00000534234 REV3LO60673 3130 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 MUC3AQ02505 3323 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
COPB1-211ENST00000534234 TMEM150BA6NC51 233 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 MARCH6O60337 910 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 CCNT1O60563 726 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 CTDNEP1O95476 244 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 FGFR1P11362 822 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 DARSP14868 501 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 PSMC5P62195 406 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 DLX2Q07687 328 aaPredicted RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 DRP2Q13474 957 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 PPP4R3AQ6IN85 833 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 PIK3AP1Q6ZUJ8 805 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 MICAL1Q8TDZ2 1067 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 WASF1Q92558 559 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.819e-8■■□□□ 13.3
COPB1-211ENST00000534234 FAM20AQ96MK3 541 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 FAM50BQ9Y247 325 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 COL4A4P53420 1690 aaPredicted RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 BDP1A6H8Y1 2624 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 EML1O00423 815 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 LINC01565O15544 149 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 MAFO75444 373 aaPredicted RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 CSDE1O75534 798 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 FDPSP14324 419 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 GCFC2P16383 781 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 FGFR4P22455 802 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 IRS1P35568 1242 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 ADAM15Q13444 863 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 ME3Q16798 604 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 ANO5Q75V66 913 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 NAP1L4Q99733 375 aaKnown RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 GCOM2Q9BZD3 368 aaPredicted RBP10.01□□□□□ -0.81
COPB1-211ENST00000534234 TMEM117Q9H0C3 514 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 HCSTQ9UBK5 93 aa10.01□□□□□ -0.81
COPB1-211ENST00000534234 SIP14410 1827 aa10□□□□□ -0.81
COPB1-211ENST00000534234 A0A087WZ62 844 aa10□□□□□ -0.81
COPB1-211ENST00000534234 A0A0U1RQF3 1178 aa10□□□□□ -0.81
COPB1-211ENST00000534234 TBX3O15119 743 aa10□□□□□ -0.81
COPB1-211ENST00000534234 HOXA2O43364 376 aa10□□□□□ -0.81
COPB1-211ENST00000534234 DKC1O60832 514 aaKnown RBP eCLIP10□□□□□ -0.81
COPB1-211ENST00000534234 FGF18O76093 207 aa10□□□□□ -0.81
COPB1-211ENST00000534234 P4HBP07237 508 aaKnown RBP10□□□□□ -0.81
COPB1-211ENST00000534234 QARSP47897 775 aaKnown RBP10□□□□□ -0.81
COPB1-211ENST00000534234 NEK4P51957 841 aa10□□□□□ -0.81
COPB1-211ENST00000534234 UBE3AQ05086 875 aa10□□□□□ -0.81
COPB1-211ENST00000534234 PPP2R5CQ13362 524 aa10□□□□□ -0.81
COPB1-211ENST00000534234 CLUL1Q15846 466 aa10□□□□□ -0.81
COPB1-211ENST00000534234 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
COPB1-211ENST00000534234 EARS2Q5JPH6 523 aaKnown RBP10□□□□□ -0.81
COPB1-211ENST00000534234 ADGRD2Q7Z7M1 963 aa10□□□□□ -0.81
COPB1-211ENST00000534234 RBM23Q86U06 439 aaKnown RBP10□□□□□ -0.81
COPB1-211ENST00000534234 ECHDC2Q86YB7 292 aa10□□□□□ -0.81
COPB1-211ENST00000534234 RHPN2Q8IUC4 686 aa10□□□□□ -0.81
COPB1-211ENST00000534234 THNSL1Q8IYQ7 743 aa10□□□□□ -0.81
COPB1-211ENST00000534234 ABI1Q8IZP0 508 aa10□□□□□ -0.81
COPB1-211ENST00000534234 COLGALT1Q8NBJ5 622 aa10□□□□□ -0.81
COPB1-211ENST00000534234 RNF169Q8NCN4 708 aa10□□□□□ -0.81
COPB1-211ENST00000534234 HAS1Q92839 578 aa10□□□□□ -0.81
COPB1-211ENST00000534234 CASD1Q96PB1 797 aa10□□□□□ -0.81
COPB1-211ENST00000534234 FDXACB1Q9BRP7 624 aaPredicted RBP10□□□□□ -0.81
COPB1-211ENST00000534234 CWH43Q9H720 699 aa10□□□□□ -0.81
COPB1-211ENST00000534234 TLE6Q9H808 572 aa10□□□□□ -0.81
COPB1-211ENST00000534234 CYP26B1Q9NR63 512 aa10□□□□□ -0.81
COPB1-211ENST00000534234 DACT1Q9NYF0 836 aa10□□□□□ -0.81
COPB1-211ENST00000534234 SUCLA2Q9P2R7 463 aaPredicted RBP10□□□□□ -0.81
COPB1-211ENST00000534234 VAV3Q9UKW4 847 aa10□□□□□ -0.81
COPB1-211ENST00000534234 TTC3P53804 2025 aa10□□□□□ -0.81
COPB1-211ENST00000534234 KAT6AQ92794 2004 aa10□□□□□ -0.81
COPB1-211ENST00000534234 PI4K2BG5E9Z4 385 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 EIF5BO60841 1220 aaKnown RBP9.99□□□□□ -0.81
COPB1-211ENST00000534234 TBX10O75333 385 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 BAG4O95429 457 aaKnown RBP9.99□□□□□ -0.81
COPB1-211ENST00000534234 EOMESO95936 686 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 LAG3P18627 525 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 KRT2P35908 639 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 NRIP1P48552 1158 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 NDUFV1P49821 464 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 NPEPPSP55786 919 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 NR5A1Q13285 461 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 EPHA7Q15375 998 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 SMAD2Q15796 467 aaKnown RBP9.99□□□□□ -0.81
COPB1-211ENST00000534234 PLA2G4FQ68DD2 849 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 LRRC55Q6ZSA7 311 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 JPH2Q9BR39 696 aaPredicted RBP9.99□□□□□ -0.81
COPB1-211ENST00000534234 LRFN3Q9BTN0 628 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 INO80BQ9C086 356 aaPredicted RBP9.99□□□□□ -0.81
COPB1-211ENST00000534234 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 CHST12Q9NRB3 414 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 RNF19AQ9NV58 838 aa9.99□□□□□ -0.81
COPB1-211ENST00000534234 PRKAG3Q9UGI9 489 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms