RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 UBASH3BQ8TF42 649 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 JDP2Q8WYK2 163 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 TRIM11Q96F44 468 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 RNPC3Q96LT9 517 aaKnown RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 ZNF396Q96N95 335 aaPredicted RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 USP28Q96RU2 1077 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 DNAJC7Q99615 494 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 LZTS2Q9BRK4 669 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 SPZ1Q9BXG8 430 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 TDRD3Q9H7E2 651 aaKnown RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 RTEL1Q9NZ71 1219 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 TMOD2Q9NZR1 351 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 ZNF70Q9UC06 446 aaPredicted RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 MAD2L2Q9UI95 211 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 HERC5Q9UII4 1024 aaKnown RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 RCOR1Q9UKL0 485 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 ISY1Q9ULR0 285 aaKnown RBP6.52□□□□□ -1.37
CHKA-208ENST00000533910 STX8Q9UNK0 236 aa6.52□□□□□ -1.37
CHKA-208ENST00000533910 LOC100289279A0A1B0GTE1 492 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 TTLL1O95922 423 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 PDHBP11177 359 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 SCG2P13521 617 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 NID1P14543 1247 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 XBP1P17861 261 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 GATA4P43694 442 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 AKAP17AQ02040 695 aaKnown RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 TCP10Q12799 353 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 NPY5RQ15761 445 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 ZSCAN23Q3MJ62 389 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 EGFLAMQ63HQ2 1017 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 CAVIN1Q6NZI2 390 aaKnown RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 FOXP4Q8IVH2 680 aaPredicted RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 NOSTRINQ8IVI9 506 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 DIS3L2Q8IYB7 885 aaKnown RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 LILRB2Q8N423 598 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 FAM151AQ8WW52 585 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 DPF2Q92785 391 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 SYAP1Q96A49 352 aaPredicted RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 ELMO3Q96BJ8 720 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 FTOQ9C0B1 505 aaKnown RBP eCLIP6.51□□□□□ -1.37
CHKA-208ENST00000533910 UBA5Q9GZZ9 404 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 FOXP1Q9H334 677 aaPredicted RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 METTL14Q9HCE5 456 aaKnown RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 OSGEPQ9NPF4 335 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 SH3GLB2Q9NR46 395 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 MAGEC2Q9UBF1 373 aaPredicted RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 PGAP2Q9UHJ9 254 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 SYNPO2Q9UMS6 1093 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
CHKA-208ENST00000533910 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
CHKA-208ENST00000533910 ZNF541Q9H0D2 1346 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 A0A1W2PQH9 124 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 CLRN2A0PK11 232 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 UPK3BL1B0FP48 263 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 CHURC1-FNTBB4DL54 471 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 UPK3BL2E5RIL1 263 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 WNT10BO00744 389 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 CYTH3O43739 400 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 ATE1O95260 518 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 WISP1O95388 367 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 GJB6O95452 261 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PARP1P09874 1014 aaKnown RBP6.5□□□□□ -1.37
CHKA-208ENST00000533910 PLCG1P19174 1290 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 GRK4P32298 578 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 SAFBQ15424 915 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHKA-208ENST00000533910 DDR2Q16832 855 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 ASPRV1Q53RT3 343 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 CCDC183Q5T5S1 534 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 ANO1Q5XXA6 986 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 TMEM179Q6ZVK1 233 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 RASGRP2Q7LDG7 609 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 CLEC10AQ8IUN9 316 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 LRRC47Q8N1G4 583 aaKnown RBP6.5□□□□□ -1.37
CHKA-208ENST00000533910 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 LINC00301Q8NCQ3 95 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 KCNG4Q8TDN1 519 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 MKL1Q969V6 931 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PGBD1Q96JS3 809 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 WDR18Q9BV38 432 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 MYOZ2Q9NPC6 264 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 VPS54Q9P1Q0 977 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 NYAP2Q9P242 653 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 KLHL3Q9UH77 587 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PPP1R9AQ9ULJ8 1098 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 MAPK8IP1Q9UQF2 711 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PARP14Q460N5 1801 aa6.5□□□□□ -1.37
CHKA-208ENST00000533910 PHIPQ8WWQ0 1821 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 A0A1W2PQ27 194 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 A0A1W2PQ64 194 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 A0A1W2PQD8 194 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 SHTN1A0MZ66 631 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 SLC22A31A6NKX4 558 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 BTBD18B2RXH4 712 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 TCP10L2B9ZVM9 353 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 KLRF2D3W0D1 207 aa6.49□□□□□ -1.37
CHKA-208ENST00000533910 hCG_1984214I3L0E3 225 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms