RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 INHAP05111 366 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 SSBP05455 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHKA-207ENST00000533728 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
CHKA-207ENST00000533728 STAT3P40763 770 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 ZNF131P52739 623 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 USP14P54578 494 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 HERVK_113P62684 666 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 FAM193AP78312 1265 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 AMPD2Q01433 879 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 ALCAMQ13740 583 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 MYBPC2Q14324 1141 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 SHHQ15465 462 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 SPA17Q15506 151 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 LRCH2Q5VUJ6 765 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 PAPD7Q5XG87 772 aaKnown RBP10.62□□□□□ -0.71
CHKA-207ENST00000533728 XRRA1Q6P2D8 792 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 PDXDC1Q6P996 788 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 FBXO38Q6PIJ6 1188 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 KIAA1328Q86T90 577 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 SLC35F6Q8N357 371 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 TMEM174Q8WUU8 243 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 BAP1Q92560 729 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 NACC1Q96RE7 527 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 WDR18Q9BV38 432 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 TEKT3Q9BXF9 490 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 TMEM39BQ9GZU3 492 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 LUC7LQ9NQ29 371 aaKnown RBP10.62□□□□□ -0.71
CHKA-207ENST00000533728 PLCB1Q9NQ66 1216 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 CXXC1Q9P0U4 656 aaPredicted RBP10.62□□□□□ -0.71
CHKA-207ENST00000533728 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
CHKA-207ENST00000533728 WDR87Q6ZQQ6 2873 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 NAV2Q8IVL1 2488 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 PI4K2BG5E9Z4 385 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 GAS7O60861 476 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 TBCAO75347 108 aaKnown RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 LYPLA2O95372 231 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 PRLRP16471 622 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 HOXA13P31271 388 aaPredicted RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 KCNMA1Q12791 1236 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 ADAM9Q13443 819 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 BMS1Q14692 1282 aaKnown RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 BRD3Q15059 726 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 CCDC85BQ15834 202 aaPredicted RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 AAK1Q2M2I8 961 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 CCDC122Q5T0U0 273 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 DCAF15Q66K64 600 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 RINT1Q6NUQ1 792 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 C1orf186Q6ZWK4 172 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 TRAPPC11Q7Z392 1133 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 MSL3Q8N5Y2 521 aaKnown RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 MSANTD4Q8NCY6 345 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.713e-6■■□□□ 13.4
CHKA-207ENST00000533728 GOLGA5Q8TBA6 731 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 JAKMIP2Q96AA8 810 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 CCDC42Q96M95 316 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 REEP2Q9BRK0 252 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 TIPINQ9BVW5 301 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
CHKA-207ENST00000533728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.61□□□□□ -0.71
CHKA-207ENST00000533728 CHD9Q3L8U1 2897 aa10.61□□□□□ -0.71
CHKA-207ENST00000533728 ZNF536O15090 1300 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CCL15-CCL14A0A0B4J2E2 113 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CCDC151A5D8V7 595 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 EML1O00423 815 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 PPP1R12BO60237 982 aaPredicted RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 SLITRK3O94933 977 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 GUCY2CP25092 1073 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 OAZ1P54368 228 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CHMP4BP1P59074 171 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 SNAP25P60880 206 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 SNRPFP62306 86 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 PSMC6P62333 389 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 PRKCZQ05513 592 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 ITIH3Q06033 890 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 KIF5AQ12840 1032 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.715e-7■■■■■ 39.6
CHKA-207ENST00000533728 LRRC41Q15345 812 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CCL15Q16663 113 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 ASTE1Q2TB18 679 aaPredicted RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 C10orf76Q5T2E6 689 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 PCNX4Q63HM2 1172 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 SFR1Q86XK3 245 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 FMNL3Q8IVF7 1028 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 RNF10Q8N5U6 811 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 CCDC155Q8N6L0 562 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 TRIM58Q8NG06 486 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 RDM1Q8NG50 284 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 HNRNPLLQ8WVV9 542 aaKnown RBP10.6□□□□□ -0.71
CHKA-207ENST00000533728 GJA10Q969M2 543 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 MMRN2Q9H8L6 949 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
CHKA-207ENST00000533728 AIPL1Q9NZN9 384 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms