RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 KLHDC7AQ5VTJ3 777 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 GADL1Q6ZQY3 521 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 C4orf19Q8IY42 314 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 IQCDQ96DY2 449 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CCDC43Q96MW1 224 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 MOV10L1Q9BXT6 1211 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CAPN6Q9Y6Q1 641 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 MYH9P35579 1960 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 ATP2A1O14983 1001 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 MOCS3O95396 460 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 DLG4P78352 724 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 KRT76Q01546 638 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 RSRC2Q7L4I2 434 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 HS2ST1Q7LGA3 356 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 SAMD3Q8N6K7 520 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 DMAC2Q9NW81 257 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 LARSQ9P2J5 1176 aaKnown RBP13.07□□□□□ -0.32
CLP1-205ENST00000533682 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 PCDHA10Q9Y5I2 948 aa13.07□□□□□ -0.32
CLP1-205ENST00000533682 A0A087X0T9 212 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 ZNF185O15231 689 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 LYPLA2O95372 231 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 FAM228BP0C875 321 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 PLS3P13797 630 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 MAGEA1P43355 309 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 SH3D19Q5HYK7 790 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 HAUS6Q7Z4H7 955 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
CLP1-205ENST00000533682 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLP1-205ENST00000533682 EDEM3Q9BZQ6 932 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 MYO6Q9UM54 1294 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 CSADQ9Y600 493 aa13.06□□□□□ -0.32
CLP1-205ENST00000533682 SLC16A3O15427 465 aaKnown RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 PPP1R12BO60237 982 aaPredicted RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 EXOC3O60645 756 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 LCA5LO95447 670 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 H2AFXP16104 143 aaPredicted RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 CLCN6P51797 869 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 JAK3P52333 1124 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 PTK2Q05397 1052 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 IRF2BP2Q7Z5L9 587 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 CAPZA3Q96KX2 299 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 PACSIN1Q9BY11 444 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 BUB1O43683 1085 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 STBD1O95210 358 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 SERPING1P05155 500 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 KLHL30Q0D2K2 578 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 GBP6Q6ZN66 633 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 SEPT14Q6ZU15 432 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 CYFIP1Q7L576 1253 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 JPH1Q9HDC5 661 aaPredicted RBP13.05□□□□□ -0.32
CLP1-205ENST00000533682 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLP1-205ENST00000533682 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 USP20Q9Y2K6 914 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 FRMD4BQ9Y2L6 1034 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
CLP1-205ENST00000533682 GOLGA8IPA6NC78 632 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 GOLGA8JA6NMD2 632 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 CCDC169A6NNP5 214 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 SFNP31947 248 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 ACTR2P61160 394 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 SPAG5Q96R06 1193 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 PSMB7Q99436 277 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 BRCA2P51587 3418 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 SEC31AO94979 1220 aaKnown RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 FMO5P49326 533 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
CLP1-205ENST00000533682 ZNF571Q7Z3V5 609 aaPredicted RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
CLP1-205ENST00000533682 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms