RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MRPS27Q92552 414 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 MFSD14AQ96MC6 490 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 NCOA5Q9HCD5 579 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 USP34Q70CQ2 3546 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 TMOD1P28289 359 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 CBX2Q14781 532 aaPredicted RBP20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 LLGL2Q6P1M3 1020 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 KCNT2Q6UVM3 1135 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 ECHDC2Q86YB7 292 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 CCDC148Q8NFR7 591 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 BICD2Q8TD16 824 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 CDCA3Q99618 268 aaPredicted RBP20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 TCF25Q9BQ70 676 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 APOL5Q9BWW9 433 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 PHF7Q9BWX1 381 aaPredicted RBP20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 ENTPD7Q9NQZ7 604 aa20.81■□□□□ 0.92
SSSCA1-206ENST00000531405 TMEM221A6NGB7 291 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 HIDE1A8MVS5 230 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 M0R296 226 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 GAS7O60861 476 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 ZSCAN20P17040 1043 aaPredicted RBP20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 EIF4BP23588 611 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 MRE11P49959 708 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 GPC3P51654 580 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 CLLU1OSQ5K130 101 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 PDE12Q6L8Q7 609 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 TRIM67Q6ZTA4 783 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 ABI1Q8IZP0 508 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 LRRC43Q8N309 656 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 SUSD6Q92537 303 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 RNF26Q9BY78 433 aaPredicted RBP20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 AGXT2Q9BYV1 514 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 KCNH6Q9H252 994 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 UNC45AQ9H3U1 944 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 NRBP2Q9NSY0 501 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 LZTS1Q9Y250 596 aa20.8■□□□□ 0.92
SSSCA1-206ENST00000531405 HOXA2O43364 376 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 CSDE1O75534 798 aaKnown RBP20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 IFNAR1P17181 557 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 TECP42680 631 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 ZXDAP98168 799 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 DRP2Q13474 957 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 KCNC3Q14003 757 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 LRCH2Q5VUJ6 765 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 SLC5A5Q92911 643 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 ZNF558Q96NG5 402 aa20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 PUF60Q9UHX1 559 aaKnown RBP20.79■□□□□ 0.92
SSSCA1-206ENST00000531405 TMEM150BA6NC51 233 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 DARSP14868 501 aaKnown RBP20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 ATF7P17544 494 aaPredicted RBP20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 PDIA3P30101 505 aaKnown RBP20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 TBC1D8BQ0IIM8 1120 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 ANKRD54Q6NXT1 300 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 FBXL16Q8N461 479 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 HELQQ8TDG4 1101 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 NLRP7Q8WX94 980 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 PBXIP1Q96AQ6 731 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 RIT2Q99578 217 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 TEKT3Q9BXF9 490 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 S1PR5Q9H228 398 aa20.78■□□□□ 0.92
SSSCA1-206ENST00000531405 ARID2Q68CP9 1835 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 FSD2A1L4K1 749 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 SP100P23497 879 aaPredicted RBP20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 USP11P51784 963 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 JAK3P52333 1124 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 NLRP5P59047 1200 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 MTERF2Q49AM1 385 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 IER5LQ5T953 404 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 SYCE2Q6PIF2 218 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 TMEM184AQ6ZMB5 413 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 TMC7Q7Z402 723 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 TBCKQ8TEA7 893 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 SH2D3AQ9BRG2 576 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 SPG21Q9NZD8 308 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 SEPT9Q9UHD8 586 aaPredicted RBP20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 CDH22Q9UJ99 828 aa20.77■□□□□ 0.92
SSSCA1-206ENST00000531405 TDP2O95551 362 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 SRGAP2BP0DMP2 458 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 SFNP31947 248 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 PPM1AP35813 382 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 TARBP2Q15633 366 aaKnown RBP20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 BMP8AQ7Z5Y6 402 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 ZNF598Q86UK7 904 aaKnown RBP20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 PRSS33Q8NF86 280 aa20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 NGRNQ9NPE2 291 aaKnown RBP20.76■□□□□ 0.91
SSSCA1-206ENST00000531405 A0A0U1RQF3 1178 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 NT5C1B-RDH14C9J2C7 533 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 PSMD10O75832 226 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 KRT17Q04695 432 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 MIER3Q7Z3K6 550 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 SLC39A11Q8N1S5 342 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 ZNF710Q8N1W2 664 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 PHOX2BQ99453 314 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 SH3GLB2Q9NR46 395 aa20.75■□□□□ 0.91
SSSCA1-206ENST00000531405 STBD1O95210 358 aa20.74■□□□□ 0.91
SSSCA1-206ENST00000531405 PSMA5P28066 241 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms