RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 KDM3AQ9Y4C1 1321 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 TCHHQ07283 1943 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 A0A087WWV3 80 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 ZBTB39O15060 712 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 SLC26A4O43511 780 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CUTAO60888 179 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 C22orf31O95567 290 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 XRCC6P12956 609 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTSF-208ENST00000530565 UBA7P41226 1012 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 NPEPPSP55786 919 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 BFSP2Q13515 415 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
CTSF-208ENST00000530565 TRIM71Q2Q1W2 868 aaKnown RBP9.56□□□□□ -0.88
CTSF-208ENST00000530565 XKR9Q5GH70 373 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 HYIQ5T013 277 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 TAF2Q6P1X5 1199 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 RUFY4Q6ZNE9 571 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 DEFB128Q7Z7B8 93 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CCDC155Q8N6L0 562 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 ZNF579Q8NAF0 562 aaKnown RBP9.56□□□□□ -0.88
CTSF-208ENST00000530565 TMEM87AQ8NBN3 555 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 PIGOQ8TEQ8 1089 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
CTSF-208ENST00000530565 WNT8BQ93098 351 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CEP170P1Q96L14 293 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 PNMA5Q96PV4 448 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 NACC1Q96RE7 527 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 ANP32EQ9BTT0 268 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CCSER1Q9C0I3 900 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CD320Q9NPF0 282 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 DDX19AQ9NUU7 478 aaKnown RBP9.56□□□□□ -0.88
CTSF-208ENST00000530565 KIAA1024Q9UPX6 916 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 PPME1Q9Y570 386 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 PCDHA2Q9Y5H9 948 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 TET1Q8NFU7 2136 aa9.56□□□□□ -0.88
CTSF-208ENST00000530565 LOXHD1Q8IVV2 1947 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 SMIM35A0A1B0GVV1 85 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 MAGEB2O15479 319 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 GPR37L1O60883 481 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 MAFO75444 373 aaPredicted RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 RFC5P40937 340 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 ME1P48163 572 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 RARRES1P49788 294 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 RBL2Q08999 1139 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 TBC1D8BQ0IIM8 1120 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 GRB10Q13322 594 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 TMEM119Q4V9L6 283 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 TMEM31Q5JXX7 168 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 AXDND1Q5T1B0 1012 aaPredicted RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 RPAINQ86UA6 219 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 HERC6Q8IVU3 1022 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 KCTD17Q8N5Z5 321 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 RETREG2Q8NC44 543 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 PHOSPHO2Q8TCD6 241 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 DNAJB3Q8WWF6 145 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 ARNTL2Q8WYA1 636 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 CALML4Q96GE6 196 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 EPSTI1Q96J88 318 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 CDK5RAP3Q96JB5 506 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 SLC9A7Q96T83 725 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 NT5C3AQ9H0P0 336 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 DBR1Q9UK59 544 aaKnown RBP9.55□□□□□ -0.88
CTSF-208ENST00000530565 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 DNM3Q9UQ16 869 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 HCN4Q9Y3Q4 1203 aa9.55□□□□□ -0.88
CTSF-208ENST00000530565 IGKV6-21A0A0C4DH24 114 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 LCHNA4D1U4 455 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 FAM86C2PA6NEL3 165 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 E9PMD0 336 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 RBAK-RBAKDNI3L0D1 243 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 CAND2O75155 1236 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 EYA4O95677 639 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 RPLP2P05387 115 aaKnown RBP9.54□□□□□ -0.88
CTSF-208ENST00000530565 IQCF3P0C7M6 154 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 CKBP12277 381 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 TMOD1P28289 359 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 TXLNAP40222 546 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 THPOP40225 353 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 CLCN3P51790 818 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
CTSF-208ENST00000530565 GPNMBQ14956 572 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 KARSQ15046 597 aaKnown RBP9.54□□□□□ -0.88
CTSF-208ENST00000530565 EFCAB12Q6NXP0 572 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 SHC4Q6S5L8 630 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 KCNK18Q7Z418 384 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 RSPH3Q86UC2 560 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 EXOC8Q8IYI6 725 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 KIAA0319LQ8IZA0 1049 aa9.54□□□□□ -0.88
CTSF-208ENST00000530565 LRRC71Q8N4P6 559 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms