RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
TM9SF1-210ENST00000530563 ZBP1Q9H171 429 aa12.15□□□□□ -0.46
TM9SF1-210ENST00000530563 MFSD1Q9H3U5 465 aa12.15□□□□□ -0.46
TM9SF1-210ENST00000530563 MAFBQ9Y5Q3 323 aaPredicted RBP12.15□□□□□ -0.46
TM9SF1-210ENST00000530563 DENND4AQ7Z401 1863 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 A0A0U1RQF3 1178 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 RXRAP19793 462 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 BCAR1P56945 870 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 TDGQ13569 410 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 TMC5Q6UXY8 1006 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 GPR149Q86SP6 731 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 BCL7CQ8WUZ0 217 aaPredicted RBP12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 CRYGNQ8WXF5 182 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 MTA3Q9BTC8 594 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 VN1R3Q9BXE9 311 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 RWDD1Q9H446 243 aaPredicted RBP12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 KCNK12Q9HB15 430 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 ZNF302Q9NR11 478 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 DZANK1Q9NVP4 752 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 DUSP12Q9UNI6 340 aa12.14□□□□□ -0.47
TM9SF1-210ENST00000530563 IGLV3-22A0A075B6J6 115 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 FAM86B1E9PN63 330 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 SH2B2O14492 632 aaPredicted RBP12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 BACH1O14867 736 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 FAM86B2P0C5J1 330 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 EIF4BP23588 611 aaKnown RBP12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 CHMLP26374 656 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 SREBF1P36956 1147 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 CLCN3P51790 818 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 FAM160B1Q5W0V3 765 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 TMTC3Q6ZXV5 915 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 SIX5Q8N196 739 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 CCDC82Q8N4S0 544 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 HELQQ8TDG4 1101 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 MAP4K1Q92918 833 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 ANO3Q9BYT9 981 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 RIC8AQ9NPQ8 531 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 SPTBN2O15020 2390 aa12.13□□□□□ -0.47
TM9SF1-210ENST00000530563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 KRBA1A5PL33 1030 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 PRC1O43663 620 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 NARSO43776 548 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 B4GALT3O60512 393 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 LILRB3O75022 631 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 CTSAP10619 480 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 LIFRP42702 1097 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 POLGP54098 1239 aaPredicted RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 FUT2Q10981 343 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 DDX53Q86TM3 631 aaKnown RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 TEX2Q8IWB9 1127 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 R4GN57 208 aa12.12□□□□□ -0.47
TM9SF1-210ENST00000530563 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 SGSM2O43147 1006 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 FGFR4P22455 802 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 TTC22Q5TAA0 569 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 EFCAB12Q6NXP0 572 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 MIS18BP1Q6P0N0 1132 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 DGLUCYQ7Z3D6 616 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 KIAA2013Q8IYS2 634 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 TMTC2Q8N394 836 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 ZNF668Q96K58 619 aaPredicted RBP12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
TM9SF1-210ENST00000530563 IPO5O00410 1097 aaKnown RBP12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 MAGEB2O15479 319 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 ZNF862O60290 1169 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 KRT37O76014 449 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 GALTP07902 379 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CALM1P0DP23 149 aa12.1□□□□□ -0.47
TM9SF1-210ENST00000530563 CALM2P0DP24 149 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms