RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 USP15Q9Y4E8 981 aaPredicted RBP23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 KMT2EQ8IZD2 1858 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 TMEM150BA6NC51 233 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 LAG3P18627 525 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 TMOD1P28289 359 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 GPC3P51654 580 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 TOB2Q14106 344 aaPredicted RBP23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 DUSP6Q16828 381 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 RNF169Q8NCN4 708 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 TBCKQ8TEA7 893 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 SLC5A5Q92911 643 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 SCLT1Q96NL6 688 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 SH2D3AQ9BRG2 576 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 TMEM117Q9H0C3 514 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 NRBP2Q9NSY0 501 aa23.41■■□□□ 1.34
TSPAN4-219ENST00000530404 FSCN2O14926 492 aa23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 CSDE1O75534 798 aaKnown RBP23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 TDP2O95551 362 aa23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 ZSCAN20P17040 1043 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 EIF4BP23588 611 aaKnown RBP23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 PSMA5P28066 241 aa23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 DRP2Q13474 957 aa23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 HERC4Q5GLZ8 1057 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 ECHDC2Q86YB7 292 aa23.4■■□□□ 1.34
TSPAN4-219ENST00000530404 USP11P51784 963 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 MTERF2Q49AM1 385 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 RUFY3Q7L099 469 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 MIER3Q7Z3K6 550 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 MRPS27Q92552 414 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 AIFM3Q96NN9 605 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 RIT2Q99578 217 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 APOL5Q9BWW9 433 aa23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 SEPT9Q9UHD8 586 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-219ENST00000530404 JAK3P52333 1124 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 EVCP57679 992 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 SSRP1Q08945 709 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 TBC1D8BQ0IIM8 1120 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 STK3Q13188 491 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 CLLU1OSQ5K130 101 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 LLGL2Q6P1M3 1020 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 KCNT2Q6UVM3 1135 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 FAM43BQ6ZT52 329 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 ABI1Q8IZP0 508 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 NLRP7Q8WX94 980 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 TCF25Q9BQ70 676 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 ENTPD7Q9NQZ7 604 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 SH3GLB2Q9NR46 395 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 PCDHA4Q9UN74 947 aa23.38■■□□□ 1.33
TSPAN4-219ENST00000530404 HIDE1A8MVS5 230 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 LOC730098B7Z3J9 87 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 PSMD10O75832 226 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 REC8O95072 547 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 DARSP14868 501 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 SFNP31947 248 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 ALYREFQ86V81 257 aaKnown RBP23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 TRIM22Q8IYM9 498 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 LRRC43Q8N309 656 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 HELQQ8TDG4 1101 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 RPGRIP1Q96KN7 1286 aa23.37■■□□□ 1.33
TSPAN4-219ENST00000530404 HOXA2O43364 376 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 PLCB3Q01970 1234 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 TARBP2Q15633 366 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 Q4G0T1 1027 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 FBXL18Q96ME1 805 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 ZNF558Q96NG5 402 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 CDCA3Q99618 268 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 ZSWIM6Q9HCJ5 1215 aa23.36■■□□□ 1.33
TSPAN4-219ENST00000530404 M0R2N6 131 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 DTNBO60941 627 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 STBD1O95210 358 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 ATF7P17544 494 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 TECP42680 631 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 BLIDQ8IZY5 108 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 EDAQ92838 391 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 CEP89Q96ST8 783 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 PHF7Q9BWX1 381 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 PUF60Q9UHX1 559 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 LZTS1Q9Y250 596 aa23.35■■□□□ 1.33
TSPAN4-219ENST00000530404 TDRD15B5MCY1 1934 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 NT5C1B-RDH14C9J2C7 533 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 CPLX1O14810 134 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 SP100P23497 879 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 KCNC3Q14003 757 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 NPY5RQ15761 445 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 LONRF3Q496Y0 759 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 PDE12Q6L8Q7 609 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 TMC7Q7Z402 723 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 ZNF598Q86UK7 904 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 SUSD6Q92537 303 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 CDH22Q9UJ99 828 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 CYP46A1Q9Y6A2 500 aa23.34■■□□□ 1.33
TSPAN4-219ENST00000530404 PIEZO1Q92508 2521 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 C2orf16Q68DN1 1984 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 A0A087WZ62 844 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 A0A0U1RQF3 1178 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 DEXIO95424 95 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 CBX2Q14781 532 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 ANKRD54Q6NXT1 300 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 B3GNT9Q6UX72 402 aa23.33■■□□□ 1.33
TSPAN4-219ENST00000530404 ETNPPLQ8TBG4 499 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms