RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SPZ1Q9BXG8 430 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 TBC1D17Q9HA65 648 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
AMBRA1-207ENST00000529553 ERICH2A1L162 156 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 SPTLC1O15269 473 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 NARSO43776 548 aaKnown RBP13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 LMNB2Q03252 620 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 TRDNQ13061 729 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 FAM160B1Q5W0V3 765 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 CYB5R4Q7L1T6 521 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 ZNF598Q86UK7 904 aaKnown RBP13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 CMASQ8NFW8 434 aaPredicted RBP13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 STAMQ92783 540 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 SECISBP2LQ93073 1101 aaKnown RBP13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 RILPL2Q969X0 211 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 OSMRQ99650 979 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 EMILIN2Q9BXX0 1053 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 PKD2L1Q9P0L9 805 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 EPS15L1Q9UBC2 864 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 CACNA1GO43497 2377 aa13.27□□□□□ -0.29
AMBRA1-207ENST00000529553 SPDYE3A6NKU9 549 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 HIP1O00291 1037 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 IFIT3O14879 490 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 DCNP07585 359 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 ADRB1P08588 477 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 METAP2P50579 478 aaKnown RBP eCLIP13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 ABHD15Q6UXT9 468 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 CATIPQ7Z7H3 387 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 IGSF21Q96ID5 467 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 WDR6Q9NNW5 1121 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 DPP7Q9UHL4 492 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 PCDHA6Q9UN73 950 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 PCDHA8Q9Y5H6 950 aa13.26□□□□□ -0.29
AMBRA1-207ENST00000529553 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 ZBTB42B2RXF5 422 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 NT5C1B-RDH14C9J2C7 533 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 EIF4BP23588 611 aaKnown RBP13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 CLCN4P51793 760 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 SPECC1Q5M775 1068 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 CWC27Q6UX04 472 aaKnown RBP13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 MAML2Q8IZL2 1156 aaPredicted RBP13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 SHDQ96IW2 340 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 CA14Q9ULX7 337 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
AMBRA1-207ENST00000529553 MAGEB2O15479 319 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 C22orf31O95567 290 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 KLRC2P26717 231 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 KIF5BP33176 963 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 STARD6P59095 220 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 WTAPQ15007 396 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 PTPN14Q15678 1187 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 ELMSAN1Q6PJG2 1045 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 RSAD2Q8WXG1 361 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 PIBF1Q8WXW3 757 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 AUTS2Q8WXX7 1259 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 KLHL5Q96PQ7 755 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 ADAMTS10Q9H324 1103 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.29
AMBRA1-207ENST00000529553 BACH1O14867 736 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 LILRB3O75022 631 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 PAPLNO95428 1278 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 VTNP04004 478 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 GALTP07902 379 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 TMOD1P28289 359 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 GNAQP50148 359 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 NLRP11P59045 1033 aaKnown RBP13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 PDXDC2PQ6P474 469 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 DCLRE1AQ6PJP8 1040 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 OSBPL6Q9BZF3 934 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
AMBRA1-207ENST00000529553 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms