RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 LRCH2Q5VUJ6 765 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 MCTP1Q6DN14 999 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SWSAP1Q6NVH7 229 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PLPPR4Q7Z2D5 763 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 SH3RF1Q7Z6J0 888 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 C7orf61Q8IZ16 206 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 C7orf31Q8N865 590 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PPP1R13LQ8WUF5 828 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 GJA10Q969M2 543 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TRIM43Q96BQ3 446 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 MTMR9Q96QG7 549 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TEKT3Q9BXF9 490 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 ERAP1Q9NZ08 941 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 HDAC6Q9UBN7 1215 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 GTF2IRD1Q9UHL9 959 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 PCDHA10Q9Y5I2 948 aa7.04□□□□□ -1.28
ATPAF1-209ENST00000529214 EMSYQ7Z589 1322 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 GOLGA6L3A6NEY3 463 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 ZBBXA8MT70 800 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 H0YGN5 161 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 KIAA0355O15063 1070 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 TLR3O15455 904 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 GAS7O60861 476 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 BAG4O95429 457 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 SFNP31947 248 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 CHMP4BP1P59074 171 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 ADAM17P78536 824 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 ORC2Q13416 577 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 ZNF174Q15697 407 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 FAM47CQ5HY64 1035 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 GDF6Q6KF10 455 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 MIS18BP1Q6P0N0 1132 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 TRIM50Q86XT4 487 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 SLFN12Q8IYM2 578 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 C4orf32Q8N8J7 132 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 GLG1Q92896 1179 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 PAIP2Q9BPZ3 127 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 UNC45AQ9H3U1 944 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 AZI2Q9H6S1 392 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 TRMT13Q9NUP7 481 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 TMEM39AQ9NV64 488 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 DMGDHQ9UI17 866 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 ZNF215Q9UL58 517 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 PCDHA12Q9UN75 941 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 FAN1Q9Y2M0 1017 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 COL4A3BPQ9Y5P4 624 aa7.03□□□□□ -1.28
ATPAF1-209ENST00000529214 NRCAMQ92823 1304 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 NEMFO60524 1076 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 LETM1O95202 739 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TIMP1P01033 207 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 PSAPP07602 524 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SMIM10L2AP0DMW4 78 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SMIM10L2BP0DMW5 78 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SYN1P17600 705 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ATP4AP20648 1035 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ITGB8P26012 769 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 HOXC8P31273 242 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 MCM7P33993 719 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SLC26A2P50443 739 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 JAK3P52333 1124 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ZNF200P98182 395 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ARID5AQ03989 594 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 PPP2R5CQ13362 524 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 BMS1Q14692 1282 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 CALCRLQ16602 461 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 PTGISQ16647 500 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 RILPL1Q5EBL4 403 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TTC38Q5R3I4 469 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 MIER3Q7Z3K6 550 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 CCDC60Q8IWA6 550 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 RDM1Q8NG50 284 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TNPO1Q92973 898 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 FAM161BQ96MY7 647 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 CTAGE1Q96RT6 745 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TMEM60Q9H2L4 133 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TTC12Q9H892 705 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ZNF302Q9NR11 478 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SETD4Q9NVD3 440 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 VAV3Q9UKW4 847 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 TBX21Q9UL17 535 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 ZMYND8Q9ULU4 1186 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 NOL7Q9UMY1 257 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SAMM50Q9Y512 469 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 PCDHB6Q9Y5E3 794 aa7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 DNMT3AQ9Y6K1 912 aaPredicted RBP7.02□□□□□ -1.29
ATPAF1-209ENST00000529214 SCN10AQ9Y5Y9 1956 aa7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 C17orf102A2RUQ5 167 aa7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 VPS37CA5D8V6 355 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 RRN3P2A6NIE6 340 aa7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 EML1O00423 815 aa7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 BACH1O14867 736 aa7.01□□□□□ -1.29
ATPAF1-209ENST00000529214 CHMP2AO43633 222 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms